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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABL05253; SV 1; linear; genomic DNA; STD; PRO; 537 BP.
XX
PA   CP000325.1
XX
DE   Mycobacterium ulcerans Agy99 alkyl hydroperoxide reductase D protein AhpD
XX
OS   Mycobacterium ulcerans Agy99
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
OX   NCBI_TaxID=362242;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..537
FT                   /organism="Mycobacterium ulcerans Agy99"
FT                   /strain="Agy99"
FT                   /mol_type="genomic DNA"
FT                   /country="Ghana:Ga district"
FT                   /isolation_source="human tissue biopsy"
FT                   /collection_date="Jul-1999"
FT   CDS             CP000325.1:3320961..3321497
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ahpD"
FT                   /locus_tag="MUL_3000"
FT                   /product="alkyl hydroperoxide reductase D protein AhpD"
FT                   /note="Detected in the cytoplasmic and membrane fractions
FT                   by LCMSMS and also detected in the extracellular matrix by
FT                   proteomics.; cytoplasmic protein; involved in oxidative
FT                   stress response."
FT                   /db_xref="GOA:A0PSD4"
FT                   /db_xref="InterPro:IPR003779"
FT                   /db_xref="UniProtKB/Swiss-Prot:A0PSD4"
FT                   /inference="protein motif:CDD:COG2128"
FT                   /inference="similar to AA sequence:RefSeq:NP_216945.1"
FT                   /experiment="confirmed by proteomics"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABL05253.1"
FT                   /translation="MSIENLKAALPEYAKDLKLNLGSISRTTVLDEEQLWGTLLASAAA
FT                   TRNAQVLAEIGAEAADNLSAQAYQAALGAVSIMGMNNVFYRGRGFLEGQYDDLRAGLRM
FT                   NIIANPGVDKANFELWSFAVSSVNGCSHCVVAHEHTLREAGVGREAVFEALKAAAIVCG
FT                   VAQALTAAQTLAAVG"
XX
SQ   Sequence 537 BP; 94 A; 151 C; 193 G; 99 T; 0 other; 3655656428 CRC32;
     atgagtatcg aaaacctcaa ggcagcgttg cctgagtacg ccaaagatct caagctgaac        60
     ctgggctcga tcagccgcac tacggtgctg gacgaagagc agctctgggg cacgcttttg       120
     gcgagcgccg cagcgactcg caatgcgcag gtgctggccg agatcggtgc ggaggcggct       180
     gacaatctgt ctgcgcaggc gtaccaggcg gcgctgggag ccgtgtcgat catgggcatg       240
     aacaacgtgt tctatcgggg gcgcggcttc ctcgagggcc agtacgacga tctgcgtgcc       300
     ggattgcgga tgaacatcat cgccaacccg ggcgtggaca aggcgaattt cgagctctgg       360
     tcctttgccg tgtcgtcggt caatgggtgc tcccattgtg tcgtggccca cgagcacacg       420
     ctgcgtgagg cgggtgtggg ccgcgaggcg gtgttcgagg cgctgaaggc ggcggctatc       480
     gtctgcggtg tggcacaagc gctcaccgct gcacagacgc tggcggccgt cggctga          537
//
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