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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABL03732; SV 1; linear; genomic DNA; STD; PRO; 1377 BP.
XX
PA   CP000325.1
XX
DE   Mycobacterium ulcerans Agy99 succinate-semialdehyde dehydrogenase [NADP+]
DE   dependent (SsdH) GabD1
XX
OS   Mycobacterium ulcerans Agy99
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
OX   NCBI_TaxID=362242;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Mycobacterium ulcerans Agy99"
FT                   /strain="Agy99"
FT                   /mol_type="genomic DNA"
FT                   /country="Ghana:Ga district"
FT                   /isolation_source="human tissue biopsy"
FT                   /collection_date="Jul-1999"
FT   CDS             complement(CP000325.1:1232590..1233966)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gabD1"
FT                   /locus_tag="MUL_1153"
FT                   /product="succinate-semialdehyde dehydrogenase [NADP+]
FT                   dependent (SsdH) GabD1"
FT                   /note="cytoplasmic protein; involved in 4-aminobutyrate
FT                   (GabA) degradation pathway [catalytic activity: succinate
FT                   semialdehyde + NAD(P)(+) + H(2)O = succinate + NAD(P)H]"
FT                   /db_xref="GOA:A0PN13"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="UniProtKB/Swiss-Prot:A0PN13"
FT                   /inference="protein motif:CDD:COG1012"
FT                   /inference="similar to AA sequence:RefSeq:NP_216247.1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABL03732.1"
FT                   /translation="MPIATTNPATGETVKTFTAASNDEVDAAIARAYARFQDYRRNTTF
FT                   AQRAEWAHATADLIEAEADQTAALMTLEMGKTIASAKAEVLKSAKGFRYYADNAAALLA
FT                   DEPADAGKVGASQAYTRYQPLGVVLAVMPWNFPLWQAGRFAAPALMAGNVGLLKHASNV
FT                   PQSALYLADVIARAGFPDGCFQTLLVSASAVEGILRDPRVAAATLTGSEPAGQSVGAIA
FT                   GDEIKPTVLELGGSDPFIVMPSADLDKAVSTAVTGRVQNNGQSCIAAKRFIAHADIYDA
FT                   FVDKFVEQMSALTVGDPTDPQTQVGPLATEQSRDEIAQQVDDAAAAGAVIRCGGKPLAG
FT                   PGWYYPPTVITDITKDMNLYTEEVFGPVASVYRAADIDEAIEIANATTFGLGSNAWTQD
FT                   EAEQRRFINDIEAGQVFINGMTVSYPELPFGGIKRSGYGRELAGHGIREFCNIKTVWVG
FT                   "
XX
SQ   Sequence 1377 BP; 250 A; 495 C; 431 G; 201 T; 0 other; 1023928129 CRC32;
     gtgccaatcg ccacgaccaa cccggcgacc ggggagacag tcaagacttt cactgcagca        60
     tccaacgatg aggtcgacgc cgcgatagcg cgcgcctacg cgcggttcca ggactaccgc       120
     cgcaacacca cgttcgccca gcgcgccgag tgggctcacg ccacggccga tctgatagag       180
     gccgaggctg accagactgc cgccctgatg acgcttgaaa tgggcaagac gatcgcatcg       240
     gccaaggccg aagtcctcaa gtccgccaag ggttttcgct actacgccga caacgctgcg       300
     gcgctgctcg ccgacgagcc cgcggacgcc ggcaaggtgg gcgcctctca ggcctacacc       360
     cgctaccagc cgctgggtgt ggtgctggcc gtgatgccgt ggaactttcc gttgtggcaa       420
     gccggccggt tcgccgcgcc cgctctgatg gccggcaacg tcgggctgct caagcacgcc       480
     tcgaacgtgc cgcagtccgc gctctacctc gccgacgtca ttgcccgcgc cggcttcccg       540
     gacggctgct tccagacgtt gctggtctcc gccagcgcgg tggaaggcat cctgcgtgac       600
     ccccgcgtgg ccgcggccac gctcaccggt agcgagcccg cgggtcagtc ggtcggcgcc       660
     atcgccggcg acgagatcaa gcccaccgtg ctcgagctcg gcggcagcga cccgttcatc       720
     gtgatgccgt cggcagacct ggacaaggcg gtcagcacgg cggtgaccgg acgggtgcag       780
     aacaacggcc aatcctgcat cgccgccaag cgattcatcg cccacgccga catctatgac       840
     gcgttcgtcg acaagttcgt cgagcagatg tcggcgctga cagtgggtga cccgaccgat       900
     ccgcaaaccc aggtcggtcc gctggccacc gaacaaagcc gcgacgaaat cgcccagcag       960
     gtcgatgacg ccgccgcggc cggggccgtg atccgctgcg gcggcaagcc cctggccggc      1020
     cccggctggt actacccgcc gacggtgatc accgacatca ccaaggacat gaacctctac      1080
     accgaagagg tcttcggccc cgtcgcctcg gtgtaccggg ccgccgacat cgatgaagca      1140
     atcgagatcg ccaacgccac cacctttggg ctgggatcca atgcctggac ccaggacgag      1200
     gcggagcagc gccgtttcat caacgacatc gaagccggcc aggtcttcat caacggcatg      1260
     acggtctcct accccgaact cccattcggc ggcatcaagc ggtccggcta cggccgcgag      1320
     ctcgccgggc acgggatccg cgagttctgc aacatcaaga ccgtctgggt cggctag         1377
//
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