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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABJ01544; SV 1; linear; genomic DNA; STD; PRO; 885 BP.
XX
PA   CP000468.1
XX
DE   Escherichia coli APEC O1 cytidine deaminase
XX
OS   Escherichia coli APEC O1
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=405955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..885
FT                   /organism="Escherichia coli APEC O1"
FT                   /strain="APEC O1"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="lesion site (lung) of a dead turkey with
FT                   colibacillosis"
FT                   /serovar="O1:K1"
FT   CDS             CP000468.1:2345830..2346714
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cdd"
FT                   /locus_tag="APECO1_4407"
FT                   /product="cytidine deaminase"
FT                   /db_xref="GOA:A1AD04"
FT                   /db_xref="InterPro:IPR013171"
FT                   /db_xref="UniProtKB/Swiss-Prot:A1AD04"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABJ01544.1"
FT                   /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSAT
FT                   GLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAE
FT                   QSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPD
FT                   AFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRI
FT                   FSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLK
FT                   ALGCHNIDRVLLA"
XX
SQ   Sequence 885 BP; 194 A; 238 C; 248 G; 205 T; 0 other; 3697969384 CRC32;
     atgcatccac gttttcaaac cgcttttgcc caacttgcgg ataacttgca atctgcactg        60
     gaacctattc tggcagacaa gtacttcccc gctttgttga ccggggagca agtctcatcg       120
     ctgaagagcg caacggggct ggacgaagac gcgctggcat tcgcactact tccgctggcg       180
     gcagcctgtg cgcgtacgcc attgtcgaat tttaatgttg gcgcaattgc gcgcggtgtg       240
     agcggaacct ggtatttcgg tgccaatatg gaatttattg gtgcgacaat gcagcaaacc       300
     gttcatgccg aacaaagcgc gatcagccac gcctggctga gtggtgaaaa agcgcttgca       360
     gccatcaccg ttaactacac gccttgtggt cactgccgtc agtttatgaa tgaactgaac       420
     agcggtctgg atctgcgtat tcatcttccg ggacgcgagg cacacgcgct gcgtgactat       480
     ctaccggatg cctttgggcc gaaagatctg gagattaaaa cgctgctgat ggacgagcag       540
     gatcacggct atgcgctgac tggtgatgcg ctttctcagg cggcgattgc ggcggcaaac       600
     cgttcgcaca tgccttacag taagtcgcca agcggtgtcg cgctggaatg taaagacggt       660
     cgtattttca gcggcagcta cgctgaaaac gccgcattca acccgactct gccgccgttg       720
     cagggggcgt taattctgtt gaatctcaag ggttatgatt acccggatat ccagcgcgcg       780
     gttctggcag aaaaagccga tgcgccgttg attcagtggg atgccacctc cgcaacgctg       840
     aaagctctcg gctgtcacaa tatcgaccgc gtgcttctcg cttaa                       885
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