spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABI39052; SV 1; linear; genomic DNA; STD; PRO; 1503 BP.
XX
PA   CP000446.1
XX
DE   Shewanella sp. MR-4 L-arabinose isomerase
XX
OS   Shewanella sp. MR-4
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=60480;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1503
FT                   /organism="Shewanella sp. MR-4"
FT                   /strain="MR-4"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000446.1:2353647..2355149
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="Shewmr4_1979"
FT                   /product="L-arabinose isomerase"
FT                   /EC_number="5.3.1.4"
FT                   /note="PFAM: L-arabinose isomerase KEGG: vpa:VPA1676
FT                   putative L-arabinose isomerase"
FT                   /db_xref="GOA:Q0HIR5"
FT                   /db_xref="InterPro:IPR003762"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0HIR5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABI39052.1"
FT                   /translation="MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVYGFNESSAIS
FT                   IEVVYKPTVKSPREIHAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLH
FT                   TQFNAELPWSEINMNYMNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDW
FT                   CRAAAGWHESQNLRIARFGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIAAIA
FT                   EGDVTAQLDRYASEYQVGNELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFEN
FT                   LTGMTGLPGLATQRLMANGFGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFG
FT                   ATDQVLGAHMLEVCPSIAAAKPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGN
FT                   RFRIILNELDTVTPPQDLPNLPVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTD
FT                   QIVDFAEMAGAELVIIDADTKIREFKNELRQNSVYYGLARGL"
XX
SQ   Sequence 1503 BP; 400 A; 368 C; 374 G; 361 T; 0 other; 1564714819 CRC32;
     atgaaagcct tcaaacaaaa acaagtgtgg tttatcacgg gttcgcagga tttatacggc        60
     ccaaaagtat tagagcaagt cgctaaaaac agtgagcaaa ttgtttatgg ctttaatgaa       120
     tcttccgcca tttccattga agtggtgtat aagccaaccg taaaatcccc acgtgaaatt       180
     cacgccgtat gtcaagcggc caacagcgat gaaaactgtg ttggcgttat tctgtggatg       240
     cacactttct ctcctgccaa gatgtggatt gctggcctta atgaattaag caagccattc       300
     atgcacttac acactcagtt caatgctgag ctcccttgga gcgaaatcaa tatgaactac       360
     atgaacaccc accaaagtgc tcacggttgc cgcgaatttg gttttatcgg cactcgtatg       420
     cgtaaagagc gcaaagtggt tgtgggtcac tggcaatcga gcgatgtaca ggctcaaatc       480
     gatgattggt gccgcgcagc ggcgggttgg cacgagagcc aaaacctgcg tattgcccgc       540
     tttggcgaca acatgcgtca agtggccgta accgaaggcg acaaagttgc cgcacaaatt       600
     caattcggtt acgaagtgca cgcctacagc ttaggtgaac tcaatgaagc gattgcagcc       660
     attgccgaag gcgatgtaac cgcacaactc gaccgttacg ccagcgaata ccaagtgggt       720
     aacgagctat ttggcgatga ataccaatta gaccgtttaa gaaaagaagc caagattgaa       780
     ctcggcttaa cccaattctt aacccaaggt ggatttggtg cctttaccaa ctgcttcgaa       840
     aacctcaccg gcatgacagg attaccagga ctggctaccc aacgtctgat ggcgaacggt       900
     ttcggttacg gcggtgaagg tgactggaaa acggctgcca tggtgcgcat catgaaggtg       960
     atgggccaag gccgcgccgg tggtacttca tttatggaag actacaccta taactttggg      1020
     gcgactgacc aagttcttgg cgcccacatg ttagaagtgt gcccatcgat tgctgctgca      1080
     aaaccgcgtt tagaagttca ccgccacacc attggtgtgc gttgtgacgt gccacgtctg      1140
     ttattcacag gtaaagcggg cccagcaatc aacgtatcga ctatcgattt aggcaaccgt      1200
     ttccgtatca ttctcaatga attagataca gtgacaccac cacaggatct gccaaatctg      1260
     cctgtcgcat ctgcgctgtg ggagcctcgt ccgaatttag cggttgccgc cgcagcttgg      1320
     atccacgccg gtggtgctca ccactcagct tacagccaag ctatcacgac ggatcagatt      1380
     gtcgactttg ctgaaatggc cggtgctgaa ctggttatca tcgatgccga tactaagatc      1440
     cgcgagttta agaatgagct tcgccaaaat tccgtttatt acggtttagc aagaggttta      1500
     taa                                                                    1503
//
spacer
spacer