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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABF14267; SV 1; linear; genomic DNA; STD; PRO; 1341 BP.
XX
PA   CP000238.1
XX
DE   Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
DE   UDP-N-acetylmuramoylalanine--D-glutamate ligase
XX
OS   Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Candidatus Baumannia.
OX   NCBI_TaxID=374463;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1341
FT                   /organism="Baumannia cicadellinicola str. Hc (Homalodisca
FT                   coagulata)"
FT                   /host="Homalodisca coagulata (glassy-winged sharpshooter)"
FT                   /strain="Hc (Homalodisca coagulata)"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Riverside, California"
FT                   /isolation_source="red portion of the bacteriome from
FT                   Homalodisca coagulata adults collected in a lemon orchard"
FT   CDS             complement(CP000238.1:538203..539543)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="BCI_0520"
FT                   /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /EC_number="6.3.2.9"
FT                   /note="identified by match to protein family HMM PF02875;
FT                   match to protein family HMM TIGR01087"
FT                   /db_xref="GOA:Q1LSW4"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q1LSW4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABF14267.1"
FT                   /translation="MTNYYGHNIVIIGLGITGITCVNFFRSRGITPRVMDTRYNPPQLN
FT                   QLPKDIQYWLGELKIEWLLAATLIVISPGISLSHPAINTAMKCGIEIIGDVELFLREVT
FT                   VPVVAITGTNGKSTVAKLVGTMANCAGLKVGVGGNIGYPVLSLLQQSHQLYVLELSSFQ
FT                   LETTKNLKVAVATILNISEDHMDRYPLGLQQYREAKLKIYKQAKIYIINDDDKLTLPAN
FT                   STNKEYCSIIKFGIKSGHYCLGDYQGKQWLMAYGKPLLDCNEIKIIGRHNLLNALAALA
FT                   LAEAIAIPRQACLIALRQFSGLMHRFELVLERKGIRWINDSKATNVGSTKAALNELTVD
FT                   GTLHLLLGGDGKLADFSSLQPFVQGNNIHLYCFGKDSKKLAALNQHSATITQTLSQAMH
FT                   IINNQVKAGDVVLLSPACSSLDQFENFKVRGKTFTNLVFEFNDGNNN"
XX
SQ   Sequence 1341 BP; 480 A; 185 C; 229 G; 447 T; 0 other; 1840428821 CRC32;
     atgactaatt attatggtca taatattgtt attataggat taggaataac aggtattact        60
     tgtgttaatt tttttagatc tcgtggaatt acaccacgtg taatggatac ccgttataat       120
     ccaccacaac taaatcagtt acctaaagat atacaatatt ggttaggtga actaaaaata       180
     gaatggctac tagctgctac actaatagta attagtcctg gtatttcttt atcgcatcca       240
     gctataaata cagcaatgaa atgtggtatt gagataattg gagatgttga attatttttg       300
     cgtgaagtaa cagtaccagt agtagctatt actggtacta atggtaaaag tactgttgct       360
     aagctagtag gtactatggc aaattgtgca gggttaaaag ttggagttgg tggtaatata       420
     ggttaccctg ttttatcact attacaacaa tctcatcaac tatatgttct tgaactatct       480
     agttttcagt tagaaacgac taaaaattta aaagtagcag tagcaactat tttaaatatt       540
     agtgaagatc atatggatcg ttatccttta ggtttacaac aataccgaga agctaaacta       600
     aaaatttata aacaagctaa gatttatata attaacgatg atgataaact tacattacca       660
     gctaatagta ctaataaaga atattgttct attattaaat ttggtattaa atcaggtcat       720
     tattgtcttg gtgattatca aggaaaacaa tggctaatgg cttatggtaa accattatta       780
     gattgtaatg aaattaaaat aattggtagg cataatctat taaatgcatt agcagcatta       840
     gcattagcag aggccatagc aataccacgt caagcttgtt tgattgcatt acgtcaattt       900
     tctgggttaa tgcatcgctt tgagctagtt ttagaaagaa aaggtatacg ttggattaat       960
     gactcaaaag ctactaatgt aggtagtact aaagcagcac ttaatgaact aacagtagat      1020
     ggaaccttac atctattact tggtggagat ggcaaattag cagacttctc atcattacaa      1080
     ccatttgtac aaggtaacaa tatacatctt tactgttttg gtaaagatag taagaagtta      1140
     gcagcactaa accaacattc agctactatt actcaaactt tatcacaagc aatgcatata      1200
     atcaataacc aagtaaaagc aggagatgtt gtattattat ctcctgcttg ttctagttta      1260
     gatcaattcg aaaattttaa agtacgaggt aaaactttta ctaatttagt atttgaattt      1320
     aatgatggta ataataatta a                                                1341
//
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