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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABF14058; SV 1; linear; genomic DNA; STD; PRO; 1197 BP.
XX
PA   CP000238.1
XX
DE   Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
DE   1-deoxy-D-xylulose 5-phosphate reductoisomerase
XX
OS   Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Candidatus Baumannia.
OX   NCBI_TaxID=374463;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1197
FT                   /organism="Baumannia cicadellinicola str. Hc (Homalodisca
FT                   coagulata)"
FT                   /host="Homalodisca coagulata (glassy-winged sharpshooter)"
FT                   /strain="Hc (Homalodisca coagulata)"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Riverside, California"
FT                   /isolation_source="red portion of the bacteriome from
FT                   Homalodisca coagulata adults collected in a lemon orchard"
FT   CDS             CP000238.1:550015..551211
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="dxr"
FT                   /locus_tag="BCI_0531"
FT                   /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase"
FT                   /EC_number="1.1.1.267"
FT                   /note="identified by match to protein family HMM PF02670;
FT                   match to protein family HMM TIGR00243"
FT                   /db_xref="GOA:Q1LSV3"
FT                   /db_xref="InterPro:IPR013512"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q1LSV3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABF14058.1"
FT                   /translation="MKYLTILGSTGSIGTSTLTVIKQNPDKFTVRALVAKNNFTLMTKQ
FT                   CLDFRPSWVGMVDKRAARELKANLAQLGIAINIISGNQAACELAALKEIDTVMAAIAGV
FT                   DGLLSTLSALRAGKRVLLANKESLVSCGRLFMNEVHQHNAQLLPVDSEHNAIFQILPEP
FT                   IQRQLGCLSLSKYGVSQIILTGSGGPFRQTPLDALATITSDQACIHPNWSMGRKISVDS
FT                   ATMMNKGLEYIEARCLFNASTDQIEVLLHPQSIFHSMVRYVDGSVLAQLAYPDMRIPIT
FT                   YALSYPTRVPIKVTPLNFLQLGTLSFDQPDNKRYPCLQLAIEASKLGQAATTTLNAANE
FT                   VAVAAFLQRKIRFTDIASVNQMVLDKINLEEPSSIEEVLCIDRQARINAHLSIRYLAL"
XX
SQ   Sequence 1197 BP; 390 A; 217 C; 223 G; 367 T; 0 other; 221342173 CRC32;
     atgaagtatt taactattct aggaagcaca ggttctattg gaactagcac attaacggta        60
     attaaacaaa accctgataa gtttactgta cgtgcactag tagcaaaaaa caactttact       120
     ttaatgacta agcagtgttt agatttccgt ccatcttggg taggaatggt cgataaaagg       180
     gctgctaggg aactaaaagc taacttagct caactaggaa ttgctattaa tattatttct       240
     ggtaatcagg ctgcttgtga actagctgca ctaaaagaga ttgataccgt tatggcagca       300
     attgcaggtg tagatggttt gctatcaact ttatcagcat tacgtgctgg taaaagagta       360
     ttactagcaa ataaagagtc actagttagt tgtggtagac tatttatgaa tgaggtacat       420
     cagcataacg cacagctatt accagtagat agcgaacata atgcaatttt tcaaatttta       480
     ccggaaccta ttcaacgtca actagggtgt ctatcactat ctaaatacgg tgtttcgcaa       540
     attatcttaa ctggttctgg tggaccattt cgtcaaacac cgctagatgc attagctaca       600
     ataacatcag atcaagcttg catacatccc aattggtcta tgggacgtaa gatatcagta       660
     gattcagcga ctatgatgaa taaaggatta gagtatattg aggcacgttg tttatttaat       720
     gcgtctactg accaaatcga agtacttttg cacccacaat ctatttttca ttcaatggta       780
     cgttatgtag atggtagtgt gctagcgcag ctagcatatc cagatatgcg tattcctatt       840
     acttatgctc tatcatatcc tactagagtt cccataaaag ttacaccttt aaacttttta       900
     caacttggta cgctcagttt tgatcaacca gataataaac gttatccatg tttacaactt       960
     gcgattgaag caagtaagct tggacaagca gctacaacaa cattaaatgc ggctaacgaa      1020
     gtagcagtag cagctttctt gcaaagaaaa attcgtttta ctgatattgc ctctgtaaac      1080
     cagatggtac tagataaaat taatttagaa gaaccttcta gtatagaaga agtattatgt      1140
     attgaccgtc aagcacgtat aaatgcccac ctcagtattc gttatttagc actataa         1197
//
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