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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABF05182; SV 1; linear; genomic DNA; STD; PRO; 1446 BP.
XX
PA   CP000266.1
XX
DE   Shigella flexneri 5 str. 8401 putative enzyme
XX
OS   Shigella flexneri 5 str. 8401
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Shigella.
OX   NCBI_TaxID=373384;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1446
FT                   /organism="Shigella flexneri 5 str. 8401"
FT                   /strain="8401"
FT                   /serotype="5"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /isolation_source="epidemic"
FT   CDS             complement(CP000266.1:3196832..3198277)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ygjO"
FT                   /locus_tag="SFV_3126"
FT                   /product="putative enzyme"
FT                   /note="Code: J; COG: COG2813"
FT                   /db_xref="GOA:Q0T0I4"
FT                   /db_xref="InterPro:IPR007848"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0T0I4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="ABF05182.1"
FT                   /translation="MDLIVIHHFIDRRGITQKLIFQILSILLESFIGGVVVCSRIAFCQ
FT                   HIAQTLFVNQCSHLRKQLLGITLKISKIAHNRPRKREKGYTHAPFSGATSKFYHSGGPM
FT                   SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIPGPVLILNDAFGALSC
FT                   ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA
FT                   LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF
FT                   NEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC
FT                   GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNALSGVEP
FT                   FRFNAVLCNPPFHQQHALTDNVAWEMFHYARRCLKINGELYIVANRHLDYFHKLKKIFG
FT                   NCTTIATNNKFVVLKAVKLGRRR"
XX
SQ   Sequence 1446 BP; 355 A; 372 C; 383 G; 336 T; 0 other; 1620620658 CRC32;
     atggatctta ttgtcataca tcactttatt gatcggcggg gcattacgca gaaactgatt        60
     tttcagatcc tgagtatatt gctagagagc tttatcggtg gcgtagtcgt gtgttcccgg       120
     atagcgtttt gccagcacat cgcccagacg ctgttcgtta atcagtgttc gcacctgcga       180
     aagcagctgc tcgggataac cctgaagata agtaagattg ctcataaccg cccacgaaaa       240
     agagaaaaag ggtatactca tgcacccttt tcaggggcaa cgtcgaaatt ttatcattca       300
     ggagggccga tgagccactt agacaacggt ttccgttcac tgacactaca acgttttccg       360
     gcgacggatg acgttaaccc gctacaggcg tgggaagcgg cagatgaata tttgctgcaa       420
     cagttggacg acacagaaat ccccggcccg gtgttgatcc tgaatgatgc ctttggtgcg       480
     ttaagctgcg cgctggcgga acataagccg tacagcattg gcgactcata catcagtgaa       540
     ctggcgacgc gcgagaattt acgcctaaac gggattgatg agtcgagcgt gaagtttctc       600
     gacagcaccg ccgactaccc gcaacagccg ggtgtggtgc tgatcaaagt gccgaaaaca       660
     ctggcattgc tggaacagca actgcgtgcg ctgcgcaaag tggtcacgtc ggatacacgt       720
     attattgccg gtgccaaagc ccgtgacatt cacacttcca cgctggaact gttcgaaaaa       780
     gtgctcggcc cgaccaccac cacgctggca tggaaaaaag cgcgcctgat taattgcacg       840
     ttcaatgaac cgccgctggc cgatgcgccg cagaccgtta gctggaagct ggaaggtact       900
     gactggacta tccataacca tgcgaatgtc ttctcccgca ccgggcttga tatcggcgcg       960
     cgcttcttta tgcaacatct gccagagaat ctcgaagggg agattgtcga tctcggttgc      1020
     ggtaatggcg ttattggtct gacgctgctt gataaaaacc cgcaggcgaa agtggtgttt      1080
     gtcgatgaat cgccgatggc ggttgcttcc agccgtttga acgttgaaac caacatgcca      1140
     gaggcgttgg atcgcagcga gtttatgatc aacaacgcgc tctccggcgt ggagcctttc      1200
     cgctttaatg ctgtgctctg caaccctccg tttcaccaac aacatgcgct gaccgataac      1260
     gtcgcctggg agatgttcca ctacgcccgc cgctgcctga aaatcaacgg cgagctgtat      1320
     atcgttgcca accgccatct ggattacttc cataaactga agaaaatttt cggcaactgc      1380
     accactattg cgacgaataa taaatttgtg gtgctgaaag cggtgaagct gggacgtcgt      1440
     cggtaa                                                                 1446
//
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