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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABF02596; SV 1; linear; genomic DNA; STD; PRO; 1671 BP.
XX
PA   CP000266.1
XX
DE   Shigella flexneri 5 str. 8401 choline dehydrogenase
XX
OS   Shigella flexneri 5 str. 8401
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Shigella.
OX   NCBI_TaxID=373384;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1671
FT                   /organism="Shigella flexneri 5 str. 8401"
FT                   /strain="8401"
FT                   /serotype="5"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /isolation_source="epidemic"
FT   CDS             complement(CP000266.1:338171..339841)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="SFV_0322"
FT                   /product="choline dehydrogenase"
FT                   /note="a flavoprotein; Code: E; COG: COG2303"
FT                   /db_xref="GOA:Q0T7N0"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0T7N0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABF02596.1"
FT                   /translation="MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRT
FT                   QMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDL
FT                   DNWAQEPGLENWSYLDCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIE
FT                   AGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMT
FT                   DHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEF
FT                   DIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGAS
FT                   NHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRI
FT                   KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDE
FT                   QLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLN
FT                   ATTIMIGEKIADMIRGQEALSRSTAGYFVANGMPVRAKK"
XX
SQ   Sequence 1671 BP; 377 A; 464 C; 493 G; 337 T; 0 other; 1585705460 CRC32;
     ttgcaatttg actacatcat tattggtgcc ggctcagccg gcaacgttct cgctacccgt        60
     ctgactgaag atccgaatac ctccgtgctg ctgcttgaag cgggcggccc ggactatcgc       120
     tttgacttcc gcacccagat gcccgcagcg ctggcgttcc cactacaggg caaacgctac       180
     aactgggcct atgaaacaga gcctgaaccg tttatgaata accgccgcat ggagtgcgga       240
     cgcggtaaag gcctgggtgg atcgtcgctg atcaacggca tgtgctacat ccgtggcaat       300
     gcgctggatc tcgataactg ggcgcaagaa cccggtctgg agaactggag ttatctcgac       360
     tgcctgccct actaccgcaa ggccgagact cgcgatgtgg gcgagaacga ctaccacggt       420
     ggcgatggcc cggtgagcgt cactacctcc aaacccggcg tcaatccgct gtttgaagcg       480
     atgattgaag cgggcgtgca ggcgggctac ccgcgcacgg acgatctcaa cggttatcag       540
     caggaaggtt ttggtccgat ggatcgcacc gtcacgccgc agggccgtcg cgccagtacc       600
     gcgcgcggtt atctcgatca ggccaaatcg cgccctaacc tgaccattcg tactcacgct       660
     atgaccgatc acatcatttt tgacggcaaa cgcgcggtgg gcgtcgaatg gctggaaggc       720
     gacagcacca tcccaacccg cgcaacggcc aacaaagaag tgctgttatg tgcaggcgcg       780
     attgcctcac cgcagatcct gcaacgctcc ggcgtcggca acgctgaact gctggcggag       840
     tttgatattc cgctggtgca tgaattaccc ggcgtcggcg aaaatcttca ggatcatctg       900
     gagatgtatc tgcaatatga gtgcaaagaa ccggtttccc tctaccctgc cctgcagtgg       960
     tggaaccagc cgaaaatcgg tgcggagtgg ctgtttggcg gcactggcgt tggtgccagc      1020
     aaccactttg aagcaggtgg atttattcgc agccgtgagg aatttgcgtg gccgaatatt      1080
     cagtaccatt tcctgccagt agcgattaac tataacggct cgaatgcagt gaaagagcac      1140
     ggtttccagt gccacgtagg atcgatgcgc tcgccaagcc gtgggcatgt gcggattaaa      1200
     tcccgcgacc cgcaccagca tccggcgatt ctgtttaact acatgtcgca cgagcaggac      1260
     tggcaggagt tccgcgacgc aattcgcatc acccgcgaga tcatgcatca acccgcgctg      1320
     gatcaatacc gtggccgcga aatcagcccc ggtgtcgaat gccagacgga tgaacagctc      1380
     gatgagttcg tgcgtaacca cgccgaaacc gccttccatc cgtgcggtac ctgcaaaatg      1440
     ggttacgacg agatgtccgt ggttgacggc gaaggccgcg tacacgggtt agaaggcctg      1500
     cgtgtggtgg atgcgtcgat tatgccgcag attatcaccg gcaatttgaa cgccacgacg      1560
     attatgattg gcgagaaaat agcggatatg attcgcgggc aagaagcgct gtcgaggagt      1620
     acggcgggat attttgtggc aaatgggatg ccggtgagag cgaaaaaatg a               1671
//
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