spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABE52018; SV 1; linear; genomic DNA; STD; PRO; 1704 BP.
XX
PA   CP000300.1
XX
DE   Methanococcoides burtonii DSM 6242 DNA ligase 1, ATP-dependent
XX
OS   Methanococcoides burtonii DSM 6242
OC   Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales;
OC   Methanosarcinaceae; Methanococcoides.
OX   NCBI_TaxID=259564;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1704
FT                   /organism="Methanococcoides burtonii DSM 6242"
FT                   /strain="DSM 6242"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000300.1:1166020..1167723
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="dnl1"
FT                   /locus_tag="Mbur_1088"
FT                   /product="DNA ligase 1, ATP-dependent"
FT                   /EC_number="6.5.1.1"
FT                   /note="Evidence code ER2"
FT                   /db_xref="GOA:Q12X08"
FT                   /db_xref="InterPro:IPR012340"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q12X08"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABE52018.1"
FT                   /translation="MTDFKEFADVCKQIEHISSSLEMTDVVSDMLKSISTEELPVVTHF
FT                   VMGDVFPAWSVEQLGVGTSLLYSALSESSGLSLKEIEDLVRSTGDIGETAVAALGKKKK
FT                   NKKKNQASLSFFSEDAASVSISIMDVFERFLDISRYSGAGSQSSKMRNLQFLFNSSSSE
FT                   EARYLARLTIEDLRIGVGEGIVRDAISKAFDVPAGDIERGFMLTNDLGLVAVAAKEGGI
FT                   EEISKLRMELDRPIKMMLAQVTPSIEAAIKDLGMLAVEWKFDGARVQIHKKGDSINIFS
FT                   RRLENVTLSLPDIVEAVKLHVKADSAILEGEAVAVDENGAPRAFQDILKRFRRKYDVET
FT                   MVREIPLTLNLFDILYLNGDVLMDQSLLRRREQLVACVENCDSIKVDEQVLTDDVNVVN
FT                   DIYAAALNGGHEGVMLKNPEASYSPGKRGKNWLKKKPIMETLDLVVIAAEWGYGKRANL
FT                   IGSYALACFDPEDGKFLPIGKVATGFSDEQLAELTEVFSELIIGESGREIELKPDVVFE
FT                   IAFEEIQKSTNYGSGYALRFPRLVNVREDKSPEEAETIDRIESIYLSQRG"
XX
SQ   Sequence 1704 BP; 448 A; 311 C; 467 G; 478 T; 0 other; 702659580 CRC32;
     atgaccgact tcaaggaatt cgctgatgtt tgtaaacaga tagaacatat ctcaagttca        60
     ctggaaatga cagatgttgt ctcggatatg ttaaagtcga tatcgacaga ggaacttcct       120
     gttgtgaccc attttgtgat gggggacgtt tttcctgcat ggagtgttga acagcttggg       180
     gtgggtacga gtcttttgta tagtgccctt tcggaatcat ccggtctttc cctgaaagag       240
     attgaggacc ttgtccgttc caccggtgat ataggggaga cagcggtagc agcacttggt       300
     aagaagaaaa agaataagaa aaagaatcaa gcatcgctct catttttttc ggaggatgca       360
     gcttctgtct ctatctccat aatggatgtc tttgaaaggt tccttgatat ttccagatat       420
     tcaggtgcag gttcgcagag ttctaagatg aggaaccttc aattcctttt caattcttcc       480
     agctccgaag aagcacggta tcttgcccga ctgactatcg aagaccttcg tattggtgtc       540
     ggtgaaggta tcgttcgtga tgctatttca aaagctttcg atgttccggc aggggatatt       600
     gaacgtggtt ttatgttaac gaacgatctg ggtcttgtgg cagttgctgc aaaagagggt       660
     ggtattgagg agatatcaaa gctcaggatg gagcttgatc gtccgataaa gatgatgctg       720
     gcacaggtta cgcctagtat tgaagctgcg atcaaggatc ttggtatgct ggctgtcgag       780
     tggaaattcg atggggcaag ggttcaaatt cataagaaag gggattcgat caacatcttt       840
     tcgagaaggc ttgagaatgt gacattatct ctgccggata tcgttgaggc agtgaagctt       900
     catgtgaagg cggattccgc aattctggaa ggtgaggctg tagcggtcga tgaaaatggg       960
     gctcctcgtg ctttccagga tatactcaaa cgcttcagga gaaagtatga tgttgaaaca      1020
     atggttcgtg agataccttt gacattgaac cttttcgata ttctgtatct gaatggggat      1080
     gtactgatgg accagtctct tttaagaaga agggaacaac tggtcgcatg tgtggagaac      1140
     tgtgatagca tcaaggtgga tgagcaggtt ctcacagatg atgtgaatgt tgtgaacgat      1200
     atatatgctg ctgcgcttaa cggtgggcac gaaggggtca tgctaaagaa cccggaagct      1260
     tcgtattctc ccggcaagcg gggtaagaac tggctcaaga agaagcctat catggagacg      1320
     ctcgacctcg ttgtcattgc tgcggaatgg ggttatggaa aacgtgcaaa tcttatcggc      1380
     tcttatgctc tggcatgttt tgacccggaa gatggaaaat tccttccgat cggcaaagta      1440
     gctacaggtt tttcagatga gcagcttgct gaacttactg aggtcttttc cgagcttatt      1500
     attggtgaat ccggtcggga gatcgaactt aaacctgatg tggtgttcga gatcgcattc      1560
     gaggagatcc agaaaagtac gaactatggt tcaggatatg ctctccgttt ccctcgactt      1620
     gtaaatgtga gggaagataa atctccggaa gaggctgaaa cgatagatcg tatcgagagc      1680
     atctatttat cacagagggg ctaa                                             1704
//
spacer
spacer