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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABD00302; SV 1; linear; genomic DNA; STD; PRO; 1245 BP.
XX
PA   CP000239.1
XX
DE   Synechococcus sp. JA-3-3Ab response regulator
XX
OS   Synechococcus sp. JA-3-3Ab
OC   Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
OX   NCBI_TaxID=321327;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1245
FT                   /organism="Synechococcus sp. JA-3-3Ab"
FT                   /strain="JA-3-3Ab"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Wyoming"
FT                   /isolation_source="top 2mm of microbial mat from collected
FT                   51-61 deg C temperature site in the Octopus Spring effluent
FT                   channel, Yellowstone National Park"
FT                   /collection_date="Jul-2002"
FT   CDS             complement(CP000239.1:2174199..2175443)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="CYA_2162"
FT                   /product="response regulator"
FT                   /note="identified by match to protein family HMM PF00072"
FT                   /db_xref="GOA:Q2JSR7"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="UniProtKB/TrEMBL:Q2JSR7"
FT                   /protein_id="ABD00302.1"
FT                   /translation="MNCPPVCTEVSAHLLNAEVSFTGVVRYFSALDKGEGLGTWSLVFH
FT                   QGRLGFAHHSLEPLERLDRHLRRLSHQVFSLTRQNCLRIHRQVEALLAQETGPLPADLL
FT                   GLSWMVTEQLLPWEAARRLNAWIGEEVLQNLLLVPGGFQQEIIPLDNVPTLGQWDGGSL
FT                   LDLIQKRLRAWQSLGPEITSPYQRPYFASRAQAERLPAEQQERLGRLLKGFSFRQLSAL
FT                   LDQDDLQIARRLHPLVKAGILVLRDPQPPFDRLPKTYSAKLETESQPSETPTVPLHLAN
FT                   ELADLGPSPQASKTWIVACIDDSEAMLSELQRLLEGHNLVIHAISDSLKALMKLTTLKP
FT                   DLILLDVGMPNVDGYQLCSLIRKSSVLKDVPVVMVTGHKGLIDRVKARLAGATDYLTKP
FT                   FRQEELLQMVFRYLS"
XX
SQ   Sequence 1245 BP; 251 A; 373 C; 351 G; 270 T; 0 other; 271171583 CRC32;
     atgaactgtc cccccgtctg tacagaagtc tcggcccatc tgctgaacgc agaggtcagc        60
     ttcacaggag ttgttcggta tttcagtgcc ttggacaaag gggaggggct gggcacttgg       120
     tcattggtgt ttcaccaagg tcgcctgggg tttgctcacc acagcttgga gcccttggag       180
     cgcttggatc gccacctgcg tcggctcagc catcaagtct tttctctgac tcgccaaaat       240
     tgcctacgta tccatcggca ggtggaggcg ctattggctc aggagactgg gcctctacct       300
     gcagaccttc tggggctgag ttggatggta acggagcaac tgctgccttg ggaagctgcg       360
     cgcaggttga atgcttggat cggcgaggag gtgctgcaaa atctgttgct ggttccaggg       420
     ggctttcagc aggagatcat cccactggac aacgtgccca ccctgggcca gtgggatggg       480
     ggatccctgc tcgacctgat ccaaaagcgg ctacgggcat ggcaatcttt ggggcctgag       540
     atcacctccc cctaccaacg gccctacttt gccagccggg cccaggcaga acgccttccc       600
     gccgagcaac aggaacggct aggccggtta ctgaaggggt ttagcttccg ccagttgagc       660
     gcccttctcg atcaagacga cctccagatc gctcgccgcc tacatcctct ggtcaaagcc       720
     ggtatccttg tcctgcggga tccccaaccc ccctttgatc ggctgcccaa aacctactcg       780
     gccaagcttg agacagaatc acagccctca gaaactccca ccgtccctct tcacctggcc       840
     aacgagcttg cagatctagg cccatctccc caggcctcga aaacctggat tgtggcctgt       900
     attgacgaca gcgaagccat gctcagcgag ttgcagcggt tgttggaagg gcacaacctg       960
     gtcattcacg ccatcagcga ctctttgaaa gccctgatga agctgaccac cctcaagcca      1020
     gatttgatcc tgctggacgt gggtatgccc aacgtggatg gctaccaatt gtgcagcctc      1080
     atccgcaaat cctccgtgtt aaaggatgtg ccggtggtga tggtcacagg ccacaaaggt      1140
     ctgatcgatc gggtgaaggc gcgcctggcc ggtgccaccg attacctgac caagcccttt      1200
     cggcaggaag aattgctgca gatggtgttt cgctatctca gctag                      1245
//
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