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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABD00211; SV 1; linear; genomic DNA; STD; PRO; 1476 BP.
XX
PA   CP000239.1
XX
DE   Synechococcus sp. JA-3-3Ab glycogen/starch synthase, ADP-glucose type
XX
OS   Synechococcus sp. JA-3-3Ab
OC   Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
OX   NCBI_TaxID=321327;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1476
FT                   /organism="Synechococcus sp. JA-3-3Ab"
FT                   /strain="JA-3-3Ab"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Wyoming"
FT                   /isolation_source="top 2mm of microbial mat from collected
FT                   51-61 deg C temperature site in the Octopus Spring effluent
FT                   channel, Yellowstone National Park"
FT                   /collection_date="Jul-2002"
FT   CDS             CP000239.1:2089672..2091147
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="glgA-1"
FT                   /locus_tag="CYA_2071"
FT                   /product="glycogen/starch synthase, ADP-glucose type"
FT                   /EC_number="2.4.1.21"
FT                   /note="identified by match to protein family HMM PF00534;
FT                   match to protein family HMM TIGR02095"
FT                   /db_xref="GOA:Q2JSZ9"
FT                   /db_xref="InterPro:IPR013534"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2JSZ9"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABD00211.1"
FT                   /translation="MYIVQIASECAPVIKAGGLGDVVYGLSRELEVRGHCVELVLPKYD
FT                   TMRYDQIWGLHDAYRDLWVPWYGGAIHCSVYCGWVHGRLCFFIEPHSGDNFFNRGCYYG
FT                   CPDDNMRFAFFSKAALEFLLKSNKRPDIIHCHDWQTGLVPVLLFEIYKYHGMENQRVCY
FT                   TIHNFKHQGFGGPEILWATGLNREPYYFHYDRLRDNFNPFALNFMKGGIVFSNFVTTVS
FT                   PTHALEARFGNYNYGLGHTLYLHQHKFRGVLNGIDYDIWNPEIDRFIPFHYTAQTLENK
FT                   AKNKKALRDQLWLQDVDKPIVAYIGRLDEQKGVHLVHHAIYRSLFKNAQFVLLGSATEP
FT                   GIGAWFAHEKRYLNDNPDVHIELGFNEELSHLIYAGADILVVPSHYEPCGLTQMIGLKY
FT                   GTVPVVRGVGGLVDTVFDRDYDTRKLPEQRNGYVFYHTDRAALESALDRAIDLWYTAPD
FT                   QFRQLQVQGMSYDYSWNYPGKEYLEIYEFIRHR"
XX
SQ   Sequence 1476 BP; 318 A; 425 C; 395 G; 338 T; 0 other; 1217882082 CRC32;
     atgtacatcg tgcagattgc gtcggaatgt gccccggtca tcaaggcggg ggggctgggg        60
     gatgtggtgt acggcctcag ccgagagctg gaagtgcggg gccactgtgt cgagctggtt       120
     ttgcccaagt acgacaccat gcgctacgac cagatctggg gcttgcacga cgcctatcgc       180
     gacctctggg tgccctggta tgggggagct attcactgct cggtgtactg cggctgggta       240
     catggccgcc tttgcttttt tattgagccc cactccggcg acaacttttt taatcgtggc       300
     tgctactacg gctgcccgga cgacaacatg cgctttgctt ttttcagcaa ggcggctctg       360
     gagtttcttc tcaaaagcaa taagcgcccc gatatcattc attgtcacga ttggcagaca       420
     ggattggtgc cggtgctgct ctttgagatt tacaagtacc acggcatgga aaaccagcgg       480
     gtatgctaca ccatccacaa ctttaaacac caaggctttg gcggcccgga aatcctctgg       540
     gccaccggcc tcaaccggga gccctattac tttcattacg accgcctgcg agataacttt       600
     aacccctttg ccctcaactt tatgaagggc gggatcgtct tttccaactt cgtgaccacc       660
     gtttccccca cccatgccct ggaagcgcga tttggtaatt acaactatgg actgggacac       720
     actctttact tgcaccagca caagtttcgc ggcgtcttga atggcatcga ctacgatatt       780
     tggaaccctg agatcgatcg ctttattcct tttcactaca cggcgcaaac tttggaaaac       840
     aaggccaaaa acaaaaaagc actgcgggat cagctatggc tacaagatgt tgataagccc       900
     attgtggcct atattgggcg gctggacgag caaaaaggcg tgcatctggt gcatcatgcc       960
     atctaccgct ccctgtttaa aaatgcccaa ttcgtgctgc tgggatccgc cacggagccg      1020
     gggatcggcg cctggtttgc ccatgagaaa cgctacctca acgacaaccc cgatgttcac      1080
     atcgagctgg gcttcaacga agaactttcc cacctcatct atgcgggggc agacatcctt      1140
     gtggtgccca gccactacga gccctgcggc cttacccaga tgatcggcct caagtacggc      1200
     acggttccgg tggtgagggg cgtgggcggc ctggtggata ccgttttcga ccgcgattac      1260
     gacactcgca aattgccgga gcagcgcaat ggctacgtgt tctaccacac ggatcgcgcg      1320
     gctctggagt cggcgctgga tcgggccatc gacctgtggt acaccgctcc cgaccagttt      1380
     cgccaactgc aagtccaggg catgagctac gactactcct ggaactaccc cggcaaagaa      1440
     tacctggaga tctacgagtt cattcgccac cgctga                                1476
//
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