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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABC89943; SV 1; linear; genomic DNA; STD; PRO; 1650 BP.
XX
PA   CP000133.1
XX
DE   Rhizobium etli CFN 42 choline dehydrogenase (CHD) protein
XX
OS   Rhizobium etli CFN 42
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
OC   Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=347834;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1650
FT                   /organism="Rhizobium etli CFN 42"
FT                   /strain="CFN 42"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000133.1:1187477..1189126)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="RHE_CH01136"
FT                   /product="choline dehydrogenase (CHD) protein"
FT                   /EC_number="1.1.99.1"
FT                   /note="similar to betA (SMc00093) [Sinorhizobium meliloti]
FT                   and AGR_C_1517p [Agrobacterium tumefaciens] Similar to
FT                   entrez-protein:P54223 Putative location:bacterial cytoplasm
FT                   Psort-Score: 0.0026; go_component: membrane [goid 0016020];
FT                   go_function: oxidoreductase activity [goid 0016491];
FT                   go_function: choline dehydrogenase activity [goid 0008812];
FT                   go_process: electron transport [goid 0006118]"
FT                   /db_xref="GOA:Q2KB43"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q2KB43"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABC89943.1"
FT                   /translation="MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQM
FT                   PAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNR
FT                   WEELGASGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQ
FT                   AGFETTEDYNGSKQEGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGIVYGLARRIVIE
FT                   NGRATGVEIERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADR
FT                   PGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAF
FT                   LRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAD
FT                   PVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYRGPEIQPGEGVQSDEQIDSFLRE
FT                   HLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMT
FT                   GEKAADHILGKQPLARSNQEPWINPRAAVSDR"
XX
SQ   Sequence 1650 BP; 316 A; 527 C; 531 G; 276 T; 0 other; 1505320177 CRC32;
     atgcaagcag atttcgtcat catcggctcg ggttccgcag gttccgccct cgcctaccgc        60
     ctctccgaag acggcaagaa ttccgtcctc gtcatcgagg ccggcggcag cgatttcggg       120
     ccgttcatcc agatgccggc cgcacttgct tggccgatga gcatgaagcg ctataattgg       180
     ggctatctct cggagccgga gccgaacctc aacaaccggc gcatcaccgc gccgcgcggc       240
     aaggtgatcg gcggctcgtc ctcgatcaat ggcatggtct atgtgcgcgg ccatgccgaa       300
     gacttcaacc gctgggaaga gctcggcgcc agcggctggg cctatgccga cgtcctcccc       360
     tatttcaagc ggatggaaca ttcgcatggg ggcgaggagg gctggcgcgg cacggacggg       420
     ccgctgcacg tacagcgcgg cggcttcacc aatccgctgt tccgcgcctt catcgaggcc       480
     ggcaagcagg cgggcttcga gacgaccgag gattacaacg gcagcaagca ggaaggcttc       540
     ggcctgatgg agcagaccat ctttgccggc cgccgctggt ctgccgccaa cgcctatctg       600
     aaaccggcgc tgaagcgcga caatgtcggg atcgtctacg gcctggcgcg ccgtatcgtc       660
     atcgagaacg ggcgggcaac cggcgtcgag atcgaacgcg gcggcaggac agaggtggtg       720
     aaggcgaacc gcgaggtgat cgtctcggcc tcctccttca actcgccgaa gcttctgatg       780
     ctgtcgggaa tcgggccggc gaagcatctg aaggagatgg gcatcgaggt gaaggccgac       840
     cggcctggtg tcggcgccaa cctgcaggac catatggaat tctacttcca gcaggtcagc       900
     accaagccgg tatcgctcta ttcctggctg ccctggttct ggcagggggt ggcgggcgcg       960
     caatggctgc tgtcgaaggg cgggctcggc gcctcaaacc agttcgaagc ctgcgccttc      1020
     ctgcgctccg cacccgggct gaagcagccc gacatccagt atcatttcct gccggtggcg      1080
     atcagctatg atggcaaggc ggcggcgaaa agtcatggct tccaggtgca tgtcggctac      1140
     aacctgtcga aatcgcgcgg cagcgtgacg ctgcgctcgc ccgacccgaa ggccgatccg      1200
     gtgctgcgct tcaactatat gagccatccg gaagactggg agaagttccg ccactgcgtg      1260
     cgcctcaccc gagaaatctt cgggcagaag gccttcgacg cctatcgcgg tcctgagatc      1320
     cagccgggcg aaggcgtgca gagcgacgag cagatcgaca gcttcctgcg agaacatctc      1380
     gaaagcgcct atcacccctg cggcacctgc aagatgggcg ccaaggacga tccgatggcg      1440
     gtggtcgatc cgcagacgcg ggtgatcggc gtcgacggct tacgcgtcgc cgacagctcg      1500
     atcttcccgc atgtcaccta cggcaacctg aacggcccct cgatcatgac cggcgagaag      1560
     gccgccgacc acatcctcgg caaacagccg ctggcgcgct ccaatcagga gccctggatc      1620
     aatccaaggg cggcggtcag cgatcggtaa                                       1650
//
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