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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   ABB15977; SV 1; linear; genomic DNA; STD; PRO; 1032 BP.
XX
PA   CP000141.1
XX
DE   Carboxydothermus hydrogenoformans Z-2901 selenide, water dikinase,
DE   selenocysteine-containing
XX
OS   Carboxydothermus hydrogenoformans Z-2901
OC   Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
OC   Thermoanaerobacteraceae; Carboxydothermus.
OX   NCBI_TaxID=246194;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1032
FT                   /organism="Carboxydothermus hydrogenoformans Z-2901"
FT                   /strain="Z-2901"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000141.1:1842765..1843796)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /transl_except=(pos:CP000141.1:1843752..1843754,aa:Sec)
FT                   /gene="selD"
FT                   /locus_tag="CHY_2058"
FT                   /product="selenide, water dikinase,
FT                   selenocysteine-containing"
FT                   /EC_number="2.7.9.3"
FT                   /note="Selenoprotein. identified by similarity to
FT                   SP:P16456; match to protein family HMM PF00586; match to
FT                   protein family HMM PF02769; match to protein family HMM
FT                   TIGR00476"
FT                   /db_xref="GOA:Q3AAF7"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3AAF7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="ABB15977.1"
FT                   /translation="MEAVKLTQLVSCAGUAAKMSPETLAQVLRYLPEINDPNALVGTNT
FT                   ADDAAVYRISDEQAIVLTVDYFTPVVDDPYYFGVIAAANSLSDIYAMGAKPLFALNVVG
FT                   FPKKLPPEILATILKGGADKAREAGIPVLGGHTVDDAEPKYGMVVCGLVHPDKIVKNHP
FT                   PHPGDSLILTKPLGIGVLTTGMKRGIVPENTAKKVMEVMETLNDKAAEVMVEVGVSAAT
FT                   DITGFGLLGHLKEMLQEEFGAEIYLTKIPAIEGAWEFAGMRVFPGGAKNNLNYLLPHLD
FT                   FAGEFAEEEKLFLADPQTSGGLLMAVSQEKKEELVKKLQQKGVLAAEIGIITGNKGKIV
FT                   VKR"
XX
SQ   Sequence 1032 BP; 285 A; 202 C; 290 G; 255 T; 0 other; 3573946088 CRC32;
     atggaagcgg taaaattgac ccagttggta agctgtgccg ggtgagcggc caagatgagt        60
     cccgagactc tggcgcaagt tttgcgctac ttaccggaga ttaatgatcc caatgctttg       120
     gttggtacca atactgccga tgatgcggcg gtttaccgga tatccgacga acaagccatt       180
     gttcttaccg tggattactt taccccggtg gtggatgacc cgtattactt cggagttatt       240
     gccgcggcca actcgttaag cgatatttat gccatggggg ccaaaccgct ttttgcgtta       300
     aacgtggtgg gttttcccaa aaagcttcct ccggagatat tagctaccat cctaaaaggc       360
     ggggcggata aagcccggga agcgggaata ccggtattgg gcgggcatac ggtagatgat       420
     gcggagccca aatacggtat ggtagtttgc ggtttggttc atccggataa aattgtaaaa       480
     aatcaccctc ctcatcccgg ggattcttta attctaacaa aacccctggg aattggggta       540
     ttaactaccg gaatgaagcg ggggatagtg cctgaaaata ccgcgaaaaa agtaatggag       600
     gtcatggaga ctttaaacga taaggccgcc gaagtaatgg tagaggtagg agtttcggcg       660
     gctacggata tcaccgggtt tgggctttta gggcatttaa aggaaatgct tcaggaagag       720
     ttcggagcgg aaatttatct tacaaagata ccggctattg aaggggcatg ggaatttgcc       780
     ggcatgaggg tatttcccgg tggggccaaa aataacttaa actacttact gccccatttg       840
     gattttgccg gtgaatttgc tgaagaagaa aagttgttcc ttgccgatcc gcaaacttcc       900
     ggaggacttt taatggccgt ttcccaggaa aagaaagaag agttggttaa aaaacttcaa       960
     caaaaagggg tattggctgc cgagattggc ataatcacgg ggaacaaagg aaagattgtc      1020
     gttaaaaggt aa                                                          1032
//
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