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EBI Dbfetch

ID   AAY92963; SV 1; linear; genomic DNA; STD; PRO; 3105 BP.
XX
PA   CP000076.1
XX
DE   Pseudomonas fluorescens Pf-5 DNA polymerase III, alpha subunit, putative
XX
OS   Pseudomonas fluorescens Pf-5
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=220664;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3105
FT                   /organism="Pseudomonas fluorescens Pf-5"
FT                   /strain="Pf-5"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000076.1:4289410..4292514)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="PFL_3697"
FT                   /product="DNA polymerase III, alpha subunit, putative"
FT                   /note="identified by match to protein family HMM PF01336;
FT                   match to protein family HMM PF02231; match to protein
FT                   family HMM PF07733; match to protein family HMM TIGR00594"
FT                   /db_xref="GOA:Q4KAD4"
FT                   /db_xref="InterPro:IPR004805"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q4KAD4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAY92963.1"
FT                   /translation="MSAYAELHCLSNFSFQRGASSAAELFQRAKALGYQALAITDECTL
FT                   AGIVRAWQASRDTGLKLIVGSEMQVEDGPRLVLLVEDLAGYQGLCRLITRARRRAEKGS
FT                   YRLLREDFAEPLPGLLALWLTGAGEPLAQGRWLQQVFPQRLWLALELHCGQDDARHLQQ
FT                   QLALARQLGLPAVACGDVHMHVRGRRALQDTMTAIRHHLPVAEAGQRLFANGERHLRPV
FT                   EVLQGLYPQALLDESLAIAGRCAFDLGQLRYQYPRELVPEGHDAGSWLRVLTQRGIVRR
FT                   WPTGARAEVLKQIDKELTLICDLGYESYFLTVHDIVDFARRQHILCQGRGSAANSVVCF
FT                   ALGITEIDPDRSTLLFERFLSRERNEPPDIDVDFEHERREEVLQYLFQRYGRHRAALTA
FT                   VVSTYHGAGAVRDVAKALGLPPDQVNALADCCGHWSDTPPSVERLQEAGFDPQSPVLRR
FT                   VLSLTGQLIGFPRHLSQHPGGFVISEQPLDHLVPVENATMAERTVIQWDKDDLDMVGLL
FT                   KVDILALGMLSAIRRCFDLIHGYRGQRYSLASIPPEDPATYEMIGRADTIGVFQIESRA
FT                   QMSMLPRLKPQNFYDLVIEVAIVRPGPIQGGMVHPYLRRRNRQEPETYPSPELEGVLKR
FT                   TLGVPLFQEQVMQIAIVAADYTPGEADQLRRSMAAWKRHGGLEPHRERLRRGMNRNGYS
FT                   DEFATQIFEQIKGFGSYGFPESHAASFALLTYASCWLKCHEPAAFACALINSWPMGFYS
FT                   PDQILQDARRHGLQVLAVDVGASDWDCSLEPIPVQPARAGNGPPGQPALRLGLRMIKGF
FT                   REDDARRIERARRQRAFVDIADLGERARLDVRAQELLADAGALQALAGDRYRARWEVAG
FT                   VERQLGLFAGLPSQEEAPVALPRPSVGEDLQADYHSLGTTLGPHPLALLRPQLAARRCR
FT                   SSRDLLAVEHGRSVSVAGLVTGRQRPGTASGVTFVTLEDEFGNVNVVVWRDLAERQRRV
FT                   LVGAQLLKVDGTLETEGEVRHLIAGRLSDLSPLLDGIHVRSRDFR"
XX
SQ   Sequence 3105 BP; 465 A; 1063 C; 1074 G; 503 T; 0 other; 2391771917 CRC32;
     atgagcgcct acgccgagct gcactgcctg tccaacttca gcttccagcg cggcgcctcc        60
     agtgccgccg aattgttcca gcgtgccaag gccctgggct accaggccct ggcgatcacc       120
     gacgagtgca ccctggcggg aatcgtccgg gcctggcagg cctcacgcga tacgggcctc       180
     aagctgatcg tcggcagtga aatgcaggtc gaggacggcc cgcggctggt gctgctggtg       240
     gaagacctgg cgggttacca gggcctgtgc cggttgatca cccgggcccg gcgccgagcc       300
     gagaagggca gctatcgcct gctgcgcgag gacttcgccg aacccttgcc ggggctgctg       360
     gccctgtggc tgacgggcgc cggcgagccg ctggcccagg gccgctggtt gcagcaggtg       420
     ttcccccagc gcctgtggct ggcgctggag ctgcattgcg gccaggacga tgcccggcac       480
     ctgcaacagc aactggccct ggcccggcaa ctggggctgc cggccgtggc ctgtggcgat       540
     gtgcacatgc acgtgcgcgg gcgccgggcg ctgcaggaca ccatgaccgc gatccgccat       600
     cacctgccgg tggccgaggc cgggcaacgc ctgttcgcca acggcgagcg ccacctgcgg       660
     cccgtcgaag tgctgcaagg cctgtacccc caggccctgc tcgacgagtc gctggccatc       720
     gccgggcgct gcgctttcga cctcggccaa ctgcgctacc aatacccccg ggagctggtg       780
     cccgagggcc acgacgctgg ctcctggctg cgggtgctga cccagcgcgg catcgtgcgc       840
     cgctggccaa ctggtgcccg ggccgaggtg ctgaagcaga tcgacaagga gctcacgctg       900
     atctgtgacc tgggctacga gagttatttc ctcacggtgc acgacatcgt cgacttcgcc       960
     cggcgccagc acatcctctg ccagggccgg ggttcggcgg ccaactcggt ggtgtgtttc      1020
     gccctcggca tcaccgagat cgacccggac cgctcgaccc tgctgttcga gcgtttcctg      1080
     tcgcgtgaac gcaacgagcc gccggacatc gacgtcgact tcgagcacga gcgccgggaa      1140
     gaggtgctgc agtatttgtt ccagcgctat ggccggcatc gcgcggcgct gaccgcggtg      1200
     gtcagcacct accacggtgc cggggcggtg cgggatgtgg ccaaggccct gggcctgccg      1260
     ccggatcagg tcaatgccct ggccgactgc tgcggccact ggagtgatac gccgcccagc      1320
     gtcgagcgcc tgcaggaggc cgggttcgat ccccagagcc cggtgctgcg ccgggtcctg      1380
     agcctgaccg ggcagttgat cggctttccc cggcacctgt cccagcaccc cggcggtttc      1440
     gtgatttccg agcagcccct ggaccacctg gtgccggtgg agaacgcgac gatggccgag      1500
     cgtacggtga tccagtggga caaggacgac ctggacatgg tcggcctgct caaggtggat      1560
     atcctcgccc tgggcatgct cagcgccatc cgccgttgct tcgacctgat ccacggctac      1620
     cgtggccagc gctacagcct cgccagcatt ccgcctgaag accccgccac ctatgaaatg      1680
     atcggccgcg ccgacaccat tggcgtgttc cagatcgagt cccgggcgca gatgtcgatg      1740
     ctgccccggc tcaagccgca gaacttctac gacctggtga tcgaggtggc catcgtccgg      1800
     cccgggccga tccagggcgg catggtccat ccctacctgc gccggcgtaa ccgtcaggag      1860
     ccggaaacct atccgtctcc ggagctggag ggcgtgctca agcgcaccct gggagtgccg      1920
     ctgtttcagg aacaggtgat gcagatcgcc attgtcgccg ccgactacac cccgggggag      1980
     gccgaccagt tgcgccgctc catggccgcc tggaagcgcc acggcggcct ggaaccgcac      2040
     cgcgaacggc tgcgccgggg gatgaaccgc aatggctaca gcgatgaatt cgcgacgcag      2100
     atcttcgagc agatcaaggg ctttggcagc tacggctttc ccgaatccca tgccgccagc      2160
     tttgccttgt tgacctacgc cagttgctgg ctcaagtgcc acgaaccggc ggccttcgcc      2220
     tgcgccctga tcaacagctg gcccatgggc ttctacagcc ccgaccagat cctccaggac      2280
     gcccggcgcc atggtttgca ggttcttgcg gtggatgtgg gcgccagtga ctgggactgc      2340
     agcctggagc cgattcctgt ccagcctgca cgcgctggaa atggcccccc cgggcagccg      2400
     gccctgcgcc tggggctgcg gatgatcaag gggtttcgcg aggacgatgc ccggcgcatc      2460
     gaacgtgccc gccggcaacg ggcctttgtc gatatcgccg acctgggcga gcgggcccgc      2520
     ctggatgtcc gcgcccagga attgctggcc gatgccggcg ccttgcaggc gctggccggg      2580
     gatcgctatc gggcacgctg ggaagtggcc ggggtggaaa gacagctggg gctgttcgcc      2640
     ggcctgccga gccaggagga agcgccggta gcgttgcccc ggcccagtgt cggcgaagac      2700
     ctgcaggcgg attaccacag cctgggcacc accctcgggc cgcaccccct ggcgctgctg      2760
     cgcccgcagc ttgcggcccg gcgctgccgc agctcgcgcg acttgctggc ggtggagcac      2820
     gggcgttcgg tgagcgtggc cgggctggtc accgggcgcc agcggccggg caccgccagc      2880
     ggggtgacct tcgtgaccct ggaagacgag ttcggcaacg tcaatgtggt ggtctggcgc      2940
     gacctggccg agcgccagcg ccgggtgctg gtgggcgcgc agttgctcaa ggtcgacggc      3000
     accctggaaa ccgagggcga ggtgcgccac ctgattgccg ggcgcctgag tgacctgagc      3060
     ccgttgctgg atggcattca cgtacgcagc cgcgactttc gttga                      3105
//


  
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