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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAY90254; SV 1; linear; genomic DNA; STD; PRO; 1305 BP.
XX
PA   CP000076.1
XX
DE   Pseudomonas fluorescens Pf-5 homogentisate 1,2-dioxygenase
XX
OS   Pseudomonas fluorescens Pf-5
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=220664;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1305
FT                   /organism="Pseudomonas fluorescens Pf-5"
FT                   /strain="Pf-5"
FT                   /mol_type="genomic DNA"
FT   CDS             CP000076.1:1108494..1109798
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="hmgA"
FT                   /locus_tag="PFL_0967"
FT                   /product="homogentisate 1,2-dioxygenase"
FT                   /EC_number="1.13.11.5"
FT                   /note="identified by similarity to SP:Q9X4F5; match to
FT                   protein family HMM PF04209; match to protein family HMM
FT                   TIGR01015"
FT                   /db_xref="GOA:Q4KI35"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q4KI35"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAY90254.1"
FT                   /translation="MNLDSSASALSYQSGFGNEFASEALPGALPVGQNSPQKAPYGLYA
FT                   ELFSGTAFTMTRSEARRTWMYRIQPSAKHPAFAKLARQLAGGPLGEVTPNRLRWSPLQI
FT                   PSEPTDFIDGLVAMVANSAAQKPAGISVYHYRANRSMERVFFNADGELLLVPELGRLRI
FT                   VTELGMLDLEPLEIAVLPRGLKFRIELLDPQARGYVAENHGAPLRLPDLGPIGSNGLAN
FT                   PRDFLAPVAHYEDLRQPTTLVQKYLGELWGCELDHSPLNVVAWHGNNVPYKYDLRRFNT
FT                   IGTVSFDHPDPSIFTVLTSPTSVPGLANLDFVIFPPRWMVAENTFRPPWFHRNLMNEFM
FT                   GLIQGAYDAKAEGFLPGGASLHSCMSAHGPDGETCTKAINAQLQPAKIDNTMAFMFETS
FT                   QVLRPSQFALECPELQNDYDACWASLPVTFNPNRR"
XX
SQ   Sequence 1305 BP; 234 A; 469 C; 379 G; 223 T; 0 other; 220516296 CRC32;
     atgaacctcg attcttcggc gtcggccctc agctaccaat cgggcttcgg caacgaattt        60
     gccagcgagg ccctgccagg ggcgctgccc gtcggccaga actccccgca aaaagcccct       120
     tatggcctgt acgccgaact gttttccggc accgccttca ccatgacccg cagcgaagcc       180
     cggcgtacct ggatgtaccg catccagccc tcggccaagc acccggcttt cgccaagctt       240
     gcgcgccagc tggcaggcgg ccccctgggt gaggtcaccc ccaaccgcct gcgctggagc       300
     cccctgcaga ttccaagcga gcccaccgat ttcatcgacg gcctggtggc gatggtggcc       360
     aactcggctg cgcagaagcc ggcgggtatc agcgtctatc actaccgtgc caaccgctcg       420
     atggagcggg tgttcttcaa tgccgatggc gagctgctgc tggtgccgga gctgggccgc       480
     ctgcgcatcg tcaccgaact gggcatgctg gacctggagc cattggaaat cgccgtgttg       540
     cctcgcgggc tgaaattccg catcgaactg ctggacccgc aagcccgtgg ctacgtcgcc       600
     gagaaccacg gtgcgccgct gcgcctgccg gaccttgggc cgattggcag caacggcctg       660
     gccaaccctc gggacttcct ggccccggtg gctcattacg aagacctgcg ccagcccacc       720
     acgctcgtcc agaagtacct cggcgagctc tggggctgcg agctcgacca ctcgccactg       780
     aacgtggtgg cctggcacgg caacaacgtg ccgtacaaat acgacctgcg tcgtttcaac       840
     accattggca ccgtcagctt cgaccacccg gacccgtcga tcttcaccgt attgacctcg       900
     cccaccagcg tgccgggcct ggccaacctg gacttcgtga tctttccgcc acgctggatg       960
     gtggccgaga acaccttccg tccaccgtgg ttccaccgca acctgatgaa cgagttcatg      1020
     ggcctgatcc agggcgccta cgatgccaag gccgaaggct tcctgcccgg cggcgcgtcg      1080
     ctgcacagtt gcatgagcgc ccacggcccg gacggcgaga cctgcaccaa ggcgatcaac      1140
     gcccagttgc agccggccaa gatcgacaac accatggcct tcatgttcga gaccagccag      1200
     gtgctgcgcc cgagccagtt cgccctggag tgcccagagc tgcagaacga ctacgatgct      1260
     tgctgggcct cgctgcccgt caccttcaac ccgaatcgga gataa                      1305
//
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