EBI Dbfetch

ID   AAX89367; SV 1; linear; mRNA; STD; PLN; 1620 BP.
XX
PA   AY972084.1
XX
DE   Oryza sativa Japonica Group sphingosine-1-phosphate lyase
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1620
FT                   /organism="Oryza sativa Japonica Group"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="mRNA"
FT   CDS             AY972084.1:1..1620
FT                   /codon_start=1
FT                   /gene="SPL"
FT                   /product="sphingosine-1-phosphate lyase"
FT                   /db_xref="GOA:Q52RG7"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q52RG7"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAX89367.1"
FT                   /translation="MELAMDFALRLRDAANHHLSRYEPLVLLAAPLLALLAARTLHAAA
FT                   AAVADRGLRTVLLALAMTAIKLLPGVSAYINAEKRKVVDQLQSGGTSTKSTLRTELPTV
FT                   GLSNQVINDLETLKARDVNWQGKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDV
FT                   FKSVAQLEAEVVAMTAALLGIKEKSSGGQICGNMTSGGTESILLAVKTSRDYMRTKKGI
FT                   TKPEMIIAESAHSAYDKAAQYFNIKVRRVPVNKEFLADVKGFKRCINGNTIMMVGSAPG
FT                   FPHGLIDPIEELGELASRYDICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSIST
FT                   DVHKYGLAPKGTSIVLYKNHEIRKHQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAAM
FT                   TSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIM
FT                   SSKGWHLNALQRPNSLHICVTLQHTVIYEEFLKDLKDSVDTVKANPGPISGGRAPIYGA
FT                   AGKMPDRGMVRELLVEFMDASC"
XX
SQ   Sequence 1620 BP; 430 A; 368 C; 411 G; 411 T; 0 other; 2812612748 CRC32;
     atggagctcg ccatggattt tgcgctccgc ctccgcgacg ccgccaacca ccacctctcc        60
     cgctacgagc ctctcgtgct cctcgccgcg cccctcctcg ccctcctcgc tgcccgcacc       120
     ctccacgccg ccgctgccgc cgtcgccgac cgcggtctcc gcaccgtcct cctcgctcta       180
     gccatgacag ccatcaagtt gcttccggga gttagcgcct acatcaacgc tgagaagagg       240
     aaggttgttg accagctgca gtcaggtggc acgtccacaa aaagtactct gcggaccgag       300
     ttgccaactg ttgggctttc caaccaagtg ataaacgatc tcgaaacact gaaagctaga       360
     gatgtaaact ggcagggaaa atgctctggc acagtttata ttgctgggag tgaatccgaa       420
     ggtcattttg cattgataaa caaggcttac tctatgtttt cacacaccaa cccacttcac       480
     caggacgtat tcaagagtgt ggcacaatta gaggctgaag tagttgcaat gacagctgct       540
     ttgcttggca tcaaagaaaa atcatccggt ggacagattt gtggtaatat gacatcgggc       600
     ggaactgaaa gcatattatt agcagtaaaa acatcacgcg actatatgcg aacaaagaag       660
     ggcattacaa agcctgaaat gataattgcc gaatcagcac attctgcata cgataaagct       720
     gctcaatatt tcaatattaa agtgcggcgt gtgccagtga acaaagagtt tcttgcagat       780
     gtgaaaggat tcaaaaggtg tataaacgga aatacgataa tgatggtggg gtctgcacca       840
     ggatttcctc atggtttaat tgatcctatt gaggaacttg gggagttggc ttcacgatat       900
     gacatttgct tgcatgttga tctctgcctt ggtggatttg tattgccttt cgctcgtaag       960
     cttgggtacc ctattcctcc attcgacttc tgtgtcaagg gagttacatc aatctcaact      1020
     gatgttcata agtatggatt agccccaaaa gggacaagca ttgtcctata taaaaatcat      1080
     gaaattagaa agcatcaatt tgttgctgtt actgaatgga ctggtgggct ctatgtttca      1140
     cctactattg ctggaagtag gcctggtggg ttgatagcgg gagcttgggc tgctatgacg      1200
     tctcttggac tgaacggtta tatggaaaat acaggtcata tcatggaagt gtcgaagaaa      1260
     atacaaagag ggattgaaga tatcccaggg ttgtttgtga ttggaaagcc agacatgact      1320
     gtcgtggcat ttggctcaga ttcggttgat atatttgagg tgaacgacat aatgtcatca      1380
     aaaggctggc accttaatgc tctgcagaga cccaacagtt tacacatttg tgtgacactg      1440
     cagcacacgg tcatatatga ggaattcctg aaggatctga aagattcagt ggacactgta      1500
     aaagcaaatc cagggcctat tagcgggggg cgagctccga tttacggagc tgctggcaag      1560
     atgccggaca gaggcatggt cagggagctg ctggtggagt tcatggacgc gtcttgctga      1620
//