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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAW36110; SV 1; linear; genomic DNA; STD; PRO; 1023 BP.
XX
PA   CP000025.1
XX
DE   Campylobacter jejuni RM1221 selenide, water dikinase
XX
OS   Campylobacter jejuni RM1221
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OX   NCBI_TaxID=195099;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1023
FT                   /organism="Campylobacter jejuni RM1221"
FT                   /strain="RM1221"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(CP000025.1:1577733..1578755)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /transl_except=(pos:CP000025.1:1578705..1578707,aa:Sec)
FT                   /gene="selD"
FT                   /locus_tag="CJE1677"
FT                   /product="selenide, water dikinase"
FT                   /EC_number="2.7.9.3"
FT                   /note="Selenoprotein. identified by similarity to
FT                   SP:P16456; match to protein family HMM PF00586; match to
FT                   protein family HMM PF02769; match to protein family HMM
FT                   TIGR00476; selenocysteine"
FT                   /db_xref="GOA:Q5HSS7"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5HSS7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAW36110.1"
FT                   /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIGN
FT                   NEDASVYQISRDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNIVG
FT                   FDTCNHDVNILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFIANN
FT                   TSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFHPSAM
FT                   SDVTGFGLLGHLKEMLNKNISFEIFQNEILFLEGAKEYFNMGLIPAGAYKNLEFIKELI
FT                   PDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDENIQAKIIAKVVNKQENDIIIS
FT                   "
XX
SQ   Sequence 1023 BP; 371 A; 132 C; 180 G; 340 T; 0 other; 58787817 CRC32;
     ctgcaatata aaaatcaaaa tttaacgcat tttgttaaag cagcaggttg agcagcgaaa        60
     ttaagcccgg gtggtcttaa aacaatttta aatttcatgc aaaaaactcc tgctttactt       120
     agtgatatcg gaaataatga agatgcaagc gtatatcaaa tcagccgcga tttagctttg       180
     gtgcaaacgc ttgattttat cactcctata gtagatagtg cttatcattt tggtgctatt       240
     gctgcagcaa atgctttaag cgatgttttt gctatgggtg cagaggtaat taatgcctta       300
     aatatagtag gttttgatac ttgtaatcat gatgtaaata tcttaaaaga gcttttagaa       360
     ggtgcaaatg ataaggttca agaatgcaat gctttagttg tgggtggcca tactatagaa       420
     agcactgagc ttttttttgg acttagtgtt acaggaaaag tacatcctag taaatttatt       480
     gctaataata cttctaaaat cggagattgt atcattttaa ccaagccttt aggaacagga       540
     attttaagta cagctttaaa ggcgcaaatg ttaaatcaaa aacatttaga tataatgctt       600
     aaaaacatga tggagttaaa ttataaagcc agtcaaattg ctcttaaatt tcatccaagt       660
     gccatgagtg atgtcacagg ttttggactt ttaggacatt taaaagaaat gctaaataaa       720
     aatatttctt ttgaaatttt ccaaaatgaa attctttttc tagagggagc aaaagaatat       780
     tttaatatgg gtttaattcc tgctggagct tataaaaatt tagaatttat aaaagaactt       840
     atccctgatt taaatgaaga aaaattatta ctttgtgatc cgcaaacttc aggaggactt       900
     ttaatttcta taagtgaaaa agaatcctta gaatgtttaa aaaaactaga agatgaaaat       960
     attcaagcta aaattattgc taaggttgta aataagcaag aaaatgatat tatcatttct      1020
     taa                                                                    1023
//
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