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EBI DbfetchID AAV92087; SV 1; linear; genomic RNA; STD; VRL; 5787 BP. XX PA AY674964.1 XX DE Taro vein chlorosis virus L XX OS Taro vein chlorosis virus OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Rhabdoviridae; OC Nucleorhabdovirus; unclassified Nucleorhabdovirus. OX NCBI_TaxID=303300; XX FH Key Location/Qualifiers FH FT source 1..5787 FT /organism="Taro vein chlorosis virus" FT /host="taro (Colocasia esculenta)" FT /mol_type="genomic RNA" FT /country="Fiji" FT CDS AY674964.1:6154..11940 FT /codon_start=1 FT /product="L" FT /note="polymerase" FT /db_xref="GOA:Q5GA85" FT /db_xref="InterPro:IPR001016" FT /db_xref="UniProtKB/Swiss-Prot:Q5GA85" FT /func_characterised="identical sequence" FT /protein_id="AAV92087.1" FT /translation="MDSDYPDLDPEALTVLDSIREGIQDEEEEDNNDKILSGTGDYHLK FT SALRTLDDMTRHPIFNKEYQKAVRHFGISPTMMMTPTAVLKLTVSQTKINKAVGFLFGD FT ILVRLDSLPWAVDCYDSIQAEIKTMHSHMMIFATPSWVEDVHNKVSSLVEYDHDATLIW FT ATVITLKNYLPAWREKGASLLDWRSVQYDPESEYLVMKVDRDFIIYVGSDICVMEIGKQ FT TLWAPVPYILNGADKVAERYNVKYYCALCDELDIPDRISLEKLNQIIEVGDDCLQALGN FT KGYDIIGSYEALLAGIIQARDNPQVIPDRELLQRTTLNDPGNTIGVTFLKRWDALMEDL FT NPEQIACAHGLYRIWGHPAVDILGGINKMREVASIVKLPSSKILTDIGRQFKEMFFTSY FT HSVHKHYPKHLIREYKSDSYIHECLKDNRTLNSKVLSYHFPDWDSVALEKNFEVPYSWN FT LVHNLKDKAISPSRSELYETLSTRNSIFGASNRRGILKSLTMETVQLRAFLQDVNDKGL FT PDNDKIIGVYPKERELKIKARLFSLMSFKLRLYFVSTEALLGDKILKYFPQITMSLDML FT SMIKKMFRVSGQTTRGDDSVTVIFNLDFVKWNLQMRKIICSPVFTQLGALFGMPNLFDI FT THDLFRESVIYLCSGEGDLRGDPVFGVAPDGVWSWTGDESGKEGLRQKGWTILTVVTIM FT LIAKRHHVDVSLMGGGDNQVLGITIGGMVRDSVGELTQDSCKLAQCTIKRFTQDLITTF FT GDLGLPLKASETWVSDSLFMYNKHMFYKGMPLRSPLKAVSRIFPLANDSIMTLDNMINN FT ISSGVKAACMKERHGIPLVFIKTMAYRRVAELSLIMHPLTVCFKKPELPDHGIVARSGK FT KLKIPVTSKNLRQYFSLCTLGSSTMGHPGTLHLPDIIMRGFPDPLTSHLSFISEMRRYI FT VDPGLASVVDKLSHLSTSPTTEYAKLVEDPTSINHDAPTHGLNEIRQMSRDFLMSTTLA FT TNPHLKSLFSLLDRGTEKDFYDALCSAQELDVKVLHEIAGATLYGYTNGIASRIDQTGT FT VRALNENIDVLRRLALAETRYIGYLMARDTREHDLKPSSCSRITAQQYRDLSWRKPILG FT VTVPHPMEMCQIMSSTETIYHDAVVCWSDRVSGSEIYQSMGQGKIYQGSYTKERFKATD FT IAAAYGNEDILVKAVRLQKLINWRYDEGSNFAKIISLTLEAITDANTEGFHRSKEEIKG FT EFDHRRGVTGDISGGIPNFLVTPTSHFSSTTSSWVSHSRGGKNENIHFQSVLINLLYRA FT MVYRGSVPGLPEMIWYSKEKCSDCITEIKDPDPIKTTPSLHTLPSAKGNPFAYIESVNV FT KLDYHHQIEITKGMEEEYLINSLWDGQNVSGEEESGLLLYLMLIGSRQISESFILLMRE FT RINAATALQYMLNRVILARKLGLDSQFPIRSTSCVNLLLGTDDNILSCRDRFNIELLSG FT SWESGVSCDMSVLYRDDLLTASELHVNVYLQNVPLQLALSRAASSTQLQSCLECQAIVL FT DRPSQRELMRYLHWCCPYHTANAPPRILRIHSEKLIKGIELRTDNPLLVPYVCNPVTLE FT RVEKVPVMVDSWELPVHMHSTWDSILPQLYLTLKSLLSQVTISSLIVDDDITLINLAAS FT VMLDLRRELPVYINVKGFSGTEINNKFDNLKLLPPNIRSSVSVYHENRSLIEASAAVWL FT PEPSSVESVGADWLVLWGDTWRMGAGVPGHVLVTESKLSTGMAWVLHRDPLASQSVLEL FT CGAVQIWEKKALDWDMREGHCVPIQMNRTLACSRLGSRGVRWTMWSTAAGLDKVTRILR FT SKLLSLSGNPGSSYHWRKGCQKILKAYVLSLYAHCVDNMLEASGRLVGVSVHGSLSGIV FT PICDMHSSDRIQRAQYLFLKERCQGGPFILRNRLERRINLLSPVHDLLDGPSQS" XX SQ Sequence 5787 BP; 1640 A; 1197 C; 1449 G; 1500 T; 1 other; 440799414 CRC32; atggattcag attatcctga ccttgatcct gaagcattaa cagtgttgga cagcattcga 60 gagggcatcc aggatgaaga ggaggaagac aacaatgata agatactcag tggcacaggg 120 gactatcatc tcaaatctgc cctgcggacc ttagatgata tgacaagaca tcccatcttc 180 aacaaggaat atcaaaaggc tgttcgtcac ttcgggatat ctcctaccat gatgatgaca 240 cctacagctg tgttgaagct caccgtgtca cagacgaaga taaacaaagc agtagggttt 300 ctatttgggg acatattggt ccgtttggac tccttacctt gggcagttga ttgttatgac 360 agcatccagg cggagataaa aacaatgcat tcacatatga tgatatttgc aacaccatca 420 tgggtggaag atgtacataa taaagtgagt tccctggtag agtatgatca tgatgccacc 480 cttatttggg ctactgtcat aactttaaag aattatcttc cggcatggag ggagaagggg 540 gcttctttgc tggattggag aagtgtacaa tatgacccgg aatcagagta cctggtaatg 600 aaggtagaca gggatttcat catttatgtg gggtccgaca tctgtgtcat ggaaattggg 660 aagcaaacac tgtgggcacc cgtcccttat attttgaatg gggcggataa ggttgcagaa 720 agatacaatg ttaaatatta ttgtgccctt tgtgatgagt tggacattcc tgacagaatc 780 tcattggaga agctgaacca aattattgaa gtaggtgatg attgtttgca agccctagga 840 aacaaagggt atgatataat cgggtcatat gaagccctcc tagctgggat catccaggcg 900 agagataacc cgcaggtaat ccctgatcgg gagctactac agaggacaac tctcaatgac 960 cctggtaata ctataggagt gacatttctg aagaggtggg atgcactcat ggaagacctt 1020 aacccagaac agattgcctg cgctcatgga ttgtacagga tatggggcca tccagcagtg 1080 gatatcctcg gggggatcaa taaaatgagg gaggtggcat caattgtgaa gcttccctcc 1140 tccaagattc ttactgatat tggaagacag ttcaaagaga tgttttttac ttcctaccat 1200 agtgttcata aacattaccc taagcatctt atacgagagt acaagtctga ctcatatatt 1260 catgagtgtt tgaaggataa taggaccctg aacagtaagg tcctgagcta tcattttcct 1320 gattgggact cggtagcact tgagaagaat tttgaggtgc cttattcctg gaatctggtg 1380 cacaatttaa aagacaaagc tatttcccca agtaggtctg agttatatga gaccttgagc 1440 accagaaatt ccatatttgg tgcatcgaac aggaggggaa ttctcaagtc actgacaatg 1500 gaaactgtcc aattaagagc attcttacaa gatgtgaatg acaaaggact cccggacaat 1560 gacaagatta taggggtcta ccctaaagaa agagagttaa aaataaaggc tagactcttc 1620 tctctcatgt cattcaagtt gagactgtat tttgtatcaa cggaggcact gctgggggac 1680 aaaatcctta agtattttcc ccagatcact atgtcgctgg acatgttgtc catgataaag 1740 aagatgttca gggtctccgg acaaacaaca cggggggatg actctgtgac agtgattttc 1800 aacttggatt ttgttaaatg gaatctccag atgaggaaga taatatgctc tccagtgttc 1860 acccaattag gggccttgtt cggcatgcct aatttgtttg acattacgca tgatttgttc 1920 cgagagagtg tgatttatct gtgttctggg gagggcgatc ttaggggaga tcctgtattt 1980 ggagttgctc cagatggagt ctggtcatgg acaggggatg agtcyggtaa agaggggctg 2040 agacaaaagg ggtggaccat cttgacggtg gttacaatca tgctgattgc aaagcgacat 2100 catgtagatg tgtcgctaat gggaggaggg gacaatcaag tactgggtat caccatagga 2160 gggatggtca gagattctgt cggggagctg acccaggact catgcaagtt ggcccagtgc 2220 acaatcaaga gatttaccca agatctgatc acaacattcg gggacttggg tctccctcta 2280 aaagcttctg aaacctgggt gagtgactcc ctatttatgt acaacaaaca tatgttctac 2340 aagggaatgc ctctacgatc tcccctcaag gcagtgtcca gaatattccc actggctaat 2400 gattcaatca tgaccctgga caacatgata aacaacatat catctggggt caaggcggca 2460 tgtatgaaag agcggcatgg aataccctta gtcttcatta agaccatggc atatagaaga 2520 gtggcggaat tgtctttgat tatgcatcct ctcaccgtct gcttcaaaaa gcccgagttg 2580 ccagatcatg gaattgtagc taggtctggt aagaagctga agatcccagt gacatcaaag 2640 aacttaaggc agtacttcag cctgtgcaca ttaggaagct ctacaatggg tcatccaggg 2700 acgctgcacc ttccagacat catcatgcga gggttccctg atcctctaac gagtcactta 2760 tcattcatct cggagatgag aaggtatata gttgatccag ggctagcatc tgttgtggac 2820 aagctgagtc atttgagcac ctcacctaca acagagtatg ccaaacttgt agaggacccc 2880 acctctatca atcatgatgc tcctactcat gggctgaatg aaatacgcca gatgtccagg 2940 gattttctca tgagcactac tctagctacc aatccccatc tgaagtcact attctctttg 3000 ctagacagag ggacagagaa ggacttttat gatgcactat gttcagccca agaacttgat 3060 gtgaaggtgt tgcatgaaat cgccggggca actctttatg ggtacacaaa tggaatagca 3120 tcaagaatcg atcagacggg gactgtccgt gctctgaatg agaatataga tgtcctccgt 3180 aggctagcac tagcagagac caggtatatt gggtacttga tggcaagaga cacccgagag 3240 catgacctga agccttcttc atgttctcgc ataaccgctc aacagtatcg ggatctgtct 3300 tggaggaagc ccatattagg ggtgacagtc ccgcacccaa tggaaatgtg ccagatcatg 3360 agttctacag agaccattta ccatgatgca gttgtatgct ggagcgatag ggtaagtgga 3420 tctgagatat atcaatctat gggccaaggg aagatatatc aaggttctta tacaaaagag 3480 cggtttaaag caacagatat agctgctgct tatggaaatg aagacatcct tgtcaaagca 3540 gtaagattac agaaattaat caattggaga tatgatgagg ggagtaattt tgcaaagatc 3600 atcagtctga ccctagaggc aatcacagat gctaacacag aggggttcca tagatcaaag 3660 gaagagatta aaggagagtt tgatcatcgg aggggggtca ccggagacat cagcggaggg 3720 atcccgaact ttctagtcac tcccacgtcc cacttctcaa gtaccacatc atcatgggtg 3780 tcccatagca gaggagggaa aaacgaaaac atccacttcc agagtgttct gataaatctg 3840 ttatataggg ccatggtcta tcggggttct gtgcctgggc ttcctgagat gatctggtat 3900 tcaaaggaga aatgtagtga ctgcataact gagattaagg accccgatcc tattaaaact 3960 accccctccc tgcacactct tccttcagcc aaagggaacc catttgcata tattgagtca 4020 gtgaatgtaa agctggatta tcatcatcaa atagaaatca ctaaggggat ggaggaagaa 4080 tatctcatca actctctttg ggacggccaa aatgtgtcag gcgaggagga gtcagggctg 4140 ctgctttacc tcatgttgat aggatccagg cagatatcag aatcgttcat tctcctaatg 4200 agagagagaa tcaatgctgc aacagcatta caatacatgc tgaatagggt catattagcc 4260 aggaagcttg gacttgattc acagttcccg ataagatcaa catcatgtgt gaatttactt 4320 ttggggactg atgacaatat tttatcttgt cgggatcggt tcaacataga gttattgtct 4380 ggatcctggg aatcaggagt gtcttgtgac atgtctgtac tgtatcgaga tgacctcctg 4440 acagcctcag aattacatgt taatgtctac cttcagaatg tccctctgca gttagctctt 4500 agtagagcag catcatccac tcagctgcaa tcctgcctag agtgtcaggc gatagtgctg 4560 gacaggccgt cccaaagaga gttgatgaga tatctgcatt ggtgctgccc ataccatact 4620 gctaatgccc ctccaagaat cctccgaata catagcgaaa aattgataaa gggcatagag 4680 ttgaggacag acaatccatt gctggtccca tatgtgtgta atcctgtaac gttagagcgt 4740 gtggagaagg ttccagtgat ggtcgactct tgggagctgc cagtgcacat gcattcaaca 4800 tgggacagta tactacccca gctttatctg accctcaaat cgctcctgtc ccaagtaaca 4860 atatcctctc ttatagtgga tgatgacatc accctcataa acttggctgc aagtgtcatg 4920 ctggatctta ggagggagct tccagtgtat atcaatgtga agggattttc aggaacagag 4980 ataaacaata aattcgacaa tctgaagctc ctgccaccca atatcaggag ctcggtcagt 5040 gtctaccatg aaaatcggtc tctgatcgaa gcatcagcag cagtgtggct tccggagccc 5100 tcttcagtgg agagtgttgg tgcggattgg ctggtgctct ggggagacac ttggagaatg 5160 ggagcgggtg taccagggca tgtattggtg actgagagca aattaagtac tggcatggca 5220 tgggttctcc atagggatcc gctcgcatct cagtctgtgc tggagttgtg tggcgctgtg 5280 caaatatggg aaaagaaggc tctggattgg gacatgcggg aaggacactg tgtacccatc 5340 cagatgaaca ggacgctggc atgttctcgg ctcgggtccc gcggggtaag gtggacgatg 5400 tggtctacag ctgcaggact agataaagtt accaggatac taagatctaa gctattatct 5460 ctatcaggca accccggatc ttcatatcat tggaggaagg gatgtcaaaa gatacttaaa 5520 gcttatgtcc tgtccttata tgctcattgc gtggacaata tgctggaggc gtctggaaga 5580 ctggtgggag tctctgtgca cgggtccctt tctggaattg ttccgatctg tgatatgcat 5640 tcatccgata ggatccaacg tgcacagtac ttattcctta aggagaggtg tcaaggagga 5700 ccatttattc tgcggaatcg tttagaaaga aggatcaatc tgctgtcccc cgttcacgat 5760 ctcctggacg gtccatccca gtcctag 5787 // |
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