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EBI DbfetchID AAT45080; SV 1; linear; genomic RNA; STD; VRL; 6630 BP. XX PA AY624354.1 XX DE Machupo virus L protein XX OS Machupo virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. OX NCBI_TaxID=11628; XX FH Key Location/Qualifiers FH FT source 1..6630 FT /organism="Machupo virus" FT /segment="L" FT /strain="Chicava" FT /mol_type="genomic RNA" FT CDS complement(AY624354.1:465..7094) FT /codon_start=1 FT /product="L protein" FT /note="L polymerase" FT /db_xref="GOA:Q6IUF8" FT /db_xref="InterPro:IPR010453" FT /db_xref="UniProtKB/Swiss-Prot:Q6IUF8" FT /func_characterised="identical sequence" FT /protein_id="AAT45080.1" FT /translation="MDEYVQELKGLIRKHIPDRCEFAHQKVTFLSQVHPSPLLTEGFKL FT LSSLVELESCEAHACQANTDQRFVDVILSDNGILCPTLPKVIPDGFKLTGKTLILLETF FT VRVNPDEFEKKWKADMSKLLNLKHDLQKSGVTLVPIVDGRSNYNNRFVADWVIERMRWL FT LIEILKASKSMLEIDIEDQEYQRLIHSLSNVKNQSLGLENLEHLKRNSLDYDERLNESL FT FIGLKGDIRESTVREELIKLKMWFKDEVFSKGLGKFKLTDRRELLESLSSLGAHLDSDV FT SSCPFCNNKLMEIVYNVTFSSVERTDGAATVDQQFSTTHTNIEKHYLSVLSLCNKIKGL FT KVFNTRRNTLLFLDLIMVNLMVDISESCQDAIESLRKSGLIVGQMVMLVNDRVLDILEA FT IKLIRKKIGTNPNWVKNCSKILERSHPEIWLQLNTLIRQPDFNSLISIAQYLVSDRPIM FT RYSVERGSDKICRHKLFQEMSSFEQMRLFKTLSSISLSLINSMKTSFSSRLLVNEREFS FT KYFGNVRLRECYAQRFYLAESLVGFLFYQKTGERSRCYSVYLSDNGVMSEQGSFYCDPK FT RFFLPVFSDEVLAGMCEEMTSWLDFDTGLMNDTGPILRLLVLAILCSPSKRNQTFLQGL FT RYFLMAFANQIHHIDLISKLVVECKSSSEVVVQRLAVGLFIRLLGGESDASSFFSRRFK FT YLLNVSYLCHLITKETPDRLTDQIKCFEKFIEPKVKFGCAVVNPSLNGKLTVDQEDIMI FT NGLKKFFSKSLRDTEDVQTPGVCKELLNYCVSLFNRGKLKVSGELKNNPFRPNITSTAL FT DLSSNKSVVIPKLDELGNILSTYDKEKLVSACVSSMAERFKTKGRYNLDPESTDYLILK FT NLTGLVSAGPKAKSSQEELSLMYETLTEEQVESFNEIKYDVQVALAKMADNSVNTRIKN FT LGRADNSVKNGNNPLDNLWSPFGVMKEIRAEVSLHEVKDFDPDVLPSDVYKELCDAVYK FT SSEKCNFFLEEVLDVCPLGLLLKNLTTSSYMEEEYFMCFKYLLIQGHFDQKLGSYEHKS FT RSRLGFTDETLRLKDEVRLSIRESNSEAIADKLDKSYFTNAALRNLCFYSEDSPTEFTS FT ISSNSGNLKFGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEAVGNSMKYTCLNSEKE FT FERAICDMKMAVNNGDLSCSYDHSKWGPTMSPALFLALLQMLELRTPVDRSKIDLDSVK FT SILKWHLHKVVEVPINVAEAYCIGKLKRSLGLMGCGSTSLSEEFFHQTMQLSGQIPSHI FT MSVLDMGQGILHNTSDLYGLITEQFLCYALDLLYDVIPVSYTSSDDQITLVKTPSLDIE FT GGSDAAEWLEMICFHEFLSSKLNKFVSPKSVIGTFVAEFKSRFFVMGEETPLLTKFVSA FT ALHNVKCKTPTQLSETIDTICDQCIANGVSTKIVARISKRVNQLIRYSGYGDTPFGAIE FT DQDVKDWVDGSRGYRLQRKIEAIFYDDKETSFIRNCARKVFNDIKRGRIFEENLINLIG FT RGGDEALTGFLQYAGCSEQEVNRVLNYRWVNLSSFGDLRLVLRTKLMTSRRVLEREEVP FT TLIKTLQSKLSRNFTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGKGGFL FT YIKEVYSGINVCICEICALKPKIIYCNDSLNKVSQFSKPILWDYFSLVLTNACELGEWV FT FSTVKEPQKPLVLNNQNFFWAVKPKVVRQIEDQLGMNHVLQSIRRNYPVLFDEHLAPFM FT NDLQVSRTMDSGRLKFLDVCIALDMMNENLGIISHLLKTRDNSVYIVKQSDCALAHIRQ FT SSYTDWELGLSPQQICTNFKTQLVLSSMVNPLVLSTSCLKSFFWFNEVLELEDDSQIEL FT AELTDFALMVKNQNVSRAMFVEDIAMGYVVSNFEGVRISLSNVMVDGVQLPPKEKAPDV FT GVLFGLKAENVIVGLVVQIDHVRMSTKFKLRRKMVYSFSLECTMDVGDIQNKEVILKVV FT AVDQSVSGSGGNHMLLDGVPVIASLPLFTGQASFDLAAMLIESNLAGSNDNFLMSNVTL FT DLGGFSPELSDKYSYRLSGPENQEDPLVLKDGAFYVGGERLSTYKVELTGDLVVKALGA FT LEDDEGVVSMLHQLWPYLKATSQVILFQQEDFTIVHDLYKIQLTKSIESFGEWIEFTNF FT KVAYSKSLKELVISDTQGSFRLKGVMCRPLANTLQVEDIE" XX SQ Sequence 6630 BP; 2047 A; 1065 C; 1537 G; 1981 T; 0 other; 3796372857 CRC32; atggatgaat atgtccaaga attgaaaggg cttattagaa agcacattcc cgataggtgc 60 gagtttgcac atcaaaaggt tacattccta tctcaggtgc atcccagtcc cttgctcaca 120 gaaggcttta agctgctttc tagtcttgtt gaacttgagt cctgtgaagc acacgcctgc 180 caggcaaaca ctgatcaaag attcgtagat gtaatactat ccgacaatgg aatcttatgt 240 ccaactttac caaaggtgat ccctgatggg ttcaaactaa ctgggaaaac cctaattctg 300 ctggagacct ttgtgagagt aaacccagat gagttcgaga agaaatggaa agctgatatg 360 tcgaagcttt taaacctgaa gcatgatctg cagaagtcgg gcgtgacttt ggttcctatt 420 gttgatggta gaagcaatta caacaataga tttgttgctg attgggtgat tgagagaatg 480 agatggttgc ttattgagat tttgaaagca tccaaatcca tgcttgagat tgatattgag 540 gaccaggaat atcaacgatt aattcatagc ctatcaaacg ttaagaatca aagcttgggg 600 ttagaaaacc tagaacattt gaaaaggaat tccctagatt atgatgagag gttgaatgag 660 tcattattta ttggtttgaa aggagacatt agagagtcaa cagtgaggga agaactcatc 720 aaactcaaaa tgtggtttaa ggatgaggtc ttcagcaaag gtctgggcaa attcaaattg 780 actgacagaa gggagttatt agagtcccta tcgagcttag gtgctcatct ggacagtgat 840 gtgtcaagct gtcccttttg taacaataag ttgatggaaa ttgtttacaa tgttaccttt 900 agcagtgttg aaaggactga tggtgcagcc acagtggacc agcagtttag caccacacac 960 actaatatag aaaaacatta ccttagtgtc ttatctttgt gcaataaaat aaaggggtta 1020 aaggtcttta acaccagaag aaacacccta ctattcttag atctcataat ggttaatttg 1080 atggttgaca ttagtgagag ttgtcaggac gctattgaaa gcttgagaaa atcaggattg 1140 atagtgggtc agatggttat gttagtgaat gatagagtgc tggacatttt ggaggctatt 1200 aaacttatca gaaaaaagat tgggactaat cccaattggg tcaagaattg ttcaaagatt 1260 ctagagagat cacatccaga aatttggctt caattaaata ctttgataag gcaaccagat 1320 tttaatagct tgatttcaat agcccaatat cttgtctcag atagaccaat catgagatat 1380 tcagtggaaa gaggctctga taagatctgt agacataaat tattccagga gatgtctagc 1440 tttgagcaaa tgaggttatt caagactttg tcctcaatat ccttgtcact aatcaattct 1500 atgaagacat ccttttcttc aagactgctt gtgaatgaga gagagttttc taagtacttt 1560 ggtaatgtta gactcagaga atgttatgcc caaaggtttt atttggctga gagtttagtt 1620 gggtttcttt tctatcagaa gacaggtgaa agatccaggt gttattcagt ttatttatct 1680 gacaacggtg tgatgtcaga acagggttca ttttattgtg atccaaagag attcttcttg 1740 cctgtttttt ctgatgaagt tttggctgga atgtgtgaag aaatgacaag ctggctggat 1800 tttgacaccg gattaatgaa tgatactggg cccatattaa ggttgttagt tctagctata 1860 ctctgctctc cgtcaaaaag gaatcaaacc tttctacaag gattgaggta ctttttaatg 1920 gcttttgcta accaaattca tcacatcgac ctaatatcta aattggtagt ggaatgcaaa 1980 tcaagttcag aagtggtggt tcaaaggctt gcagtgggac tcttcattag actacttggt 2040 ggtgagtcag atgcaagttc atttttctca agaagattca aatatctgct gaatgttagt 2100 tacctttgtc atttaatcac aaaggaaaca cctgacagat tgacagatca gatcaagtgt 2160 tttgagaagt tcattgagcc caaagttaag tttggatgtg ctgtggtgaa cccatctcta 2220 aatggaaaac tgactgtaga tcaggaagac attatgataa atgggttgaa aaagtttttc 2280 tcaaaatcct taagggacac tgaggatgtg cagacaccag gtgtgtgtaa agaactttta 2340 aactattgtg tgtctttgtt taatagggga aagttaaagg tttctgggga gcttaagaat 2400 aatcccttta gacctaatat aacaagtact gctttagact tatcaagtaa caagagtgtt 2460 gttataccaa aactagatga gttaggtaac atcctctcca cctatgacaa agaaaaactg 2520 gtgtcagcat gtgtttcctc tatggcagag agatttaaaa ccaagggaag gtacaatcta 2580 gatccggagt caactgacta tttgatttta aaaaatctga caggtttggt gagtgcaggg 2640 ccaaaagcta aaagtagtca agaagaattg tctttaatgt acgagacgtt aacagaagaa 2700 caggttgaat cattcaatga aattaaatat gatgtgcaag ttgccttagc caagatggct 2760 gacaacagtg tgaacacaag aattaaaaat ctcggccgag ctgataactc agtaaaaaat 2820 gggaataatc ctttggataa tctgtggtca ccttttgggg tgatgaaaga gattagggct 2880 gaagtatcgt tacatgaagt caaggatttt gacccagatg ttcttccttc tgatgtgtac 2940 aaggagttgt gtgacgcagt ttacaaatcg tcagaaaaat gcaacttttt ccttgaggaa 3000 gtacttgatg tttgtccctt ggggttgctg ttgaaaaatc tgaccacatc aagttatatg 3060 gaagaagagt attttatgtg ttttaaatac ctcttgatac aaggtcactt tgatcaaaaa 3120 ttaggaagtt acgagcacaa aagcagatct agactgggtt tcaccgatga gacgttaaga 3180 ctcaaagacg aggttagact tagtataaga gaaagtaact cagaggcgat tgcagacaag 3240 ttggacaaaa gttacttcac caatgctgca ttaaggaatc tgtgttttta ttctgaagat 3300 tcgcccactg agttcacaag tattagttcc aactcaggaa accttaaatt tggtctaagt 3360 tataaggaac aggtgggttc aaacagagag ctctatgtag gagacctcaa cacaaaactg 3420 atgacaagat tggtggagga tttttctgaa gctgtgggga attctatgaa gtacacctgt 3480 ttaaattctg aaaaggaatt tgaacgggca atttgtgaca tgaagatggc agtgaataat 3540 ggtgatttgt catgttctta tgatcactca aaatggggtc caacaatgag tcctgcactt 3600 ttcctggcat tattacaaat gctagaattg agaacccctg ttgacaggtc aaaaattgat 3660 cttgattctg ttaaaagtat actgaaatgg caccttcaca aagttgtaga agtacctatt 3720 aatgtggctg aagcctattg tattggaaag ctgaaaaggt cccttggatt gatgggctgc 3780 ggctccacca gtttgagtga agagttcttc catcagacta tgcaactgag tggtcagatt 3840 cctagtcaca ttatgtctgt tttggacatg gggcaaggga tactacataa cacttctgat 3900 ttgtatggat taattacaga gcagtttttg tgttatgcac tcgatctttt gtatgatgta 3960 atccctgtgt catatacctc tagtgacgat cagattactc ttgtcaagac accttctctg 4020 gatatagaag ggggttcaga tgctgcggag tggctcgaga tgatctgctt ccatgagttt 4080 ctgtcatcta aattgaataa gtttgtcagt cccaagagtg tcatcgggac ctttgtcgca 4140 gagttcaaat caagattttt tgtcatgggt gaagaaacac cattgctcac aaagtttgtt 4200 tctgcagctt tacataatgt aaagtgtaaa acacccacac aattgtcaga aactatagat 4260 accatctgtg atcaatgcat tgcaaatgga gtcagcacca aaatagtggc aagaatatca 4320 aaacgagtta accagttaat tagatactcc gggtatggag acactccctt tggggccatt 4380 gaagaccaag atgtgaaaga ctgggtggat ggctcaaggg gttaccgtct acagagaaaa 4440 attgaagcta ttttttatga tgacaaagaa acttctttta ttaggaactg tgccagaaag 4500 gtttttaatg atataaagcg tggcagaata tttgaggaga atctgatcaa tttgattggt 4560 agaggtggtg atgaggcctt gactggtttt ttacagtatg caggttgtag tgaacaagaa 4620 gttaatcgtg tgttgaacta tagatgggtg aatttatcaa gttttggaga tcttaggtta 4680 gttttgagga caaagttgat gacaagtaga agagttcttg aaagggagga agtgccaaca 4740 ttaattaaaa ccttgcagtc caaactttcc agaaacttca caaaaggagt taagaaaatc 4800 cttgctgagt caattaataa atcagctttc cagtcatccg ttgcctcagg ttttattggt 4860 ttctgcaaaa gtatgggtag caagtgtgtt agagatggga agggaggatt tttatacata 4920 aaagaagtgt attcgggtat aaatgtttgc atatgtgaaa tatgtgcgtt aaagcctaag 4980 atcatatatt gcaacgactc acttaataaa gtgagtcagt tttcaaaacc tattttgtgg 5040 gattactttt cattagtcct aacaaatgca tgtgaacttg gagaatgggt gttttctaca 5100 gttaaagagc cccaaaagcc attagtgttg aacaaccaaa actttttttg ggctgtgaag 5160 cctaaagtgg tgagacaaat tgaagaccaa ctgggaatga accatgttct gcaatctata 5220 aggagaaatt atccagttct ctttgacgaa cacttggctc cattcatgaa tgatcttcag 5280 gtcagcagaa caatggatag cgggaggcta aaatttctgg atgtttgcat tgctttagac 5340 atgatgaatg aaaaccttgg tatcatcagt cacctgttga aaaccagaga caacagtgtt 5400 tacatagtta aacaaagtga ttgtgcctta gcacacatta ggcagtcaag ctatacagat 5460 tgggagttgg gacttagtcc gcagcagatt tgcacaaact tcaagaccca gttggtcctg 5520 tcgtcaatgg taaacccatt agtcctatca acatcttgtc tgaagtcatt tttctggttc 5580 aatgaagttc tagagctaga ggatgatagt caaattgagt tagcagaatt gactgatttt 5640 gccttaatgg ttaagaatca aaatgtttcc agagctatgt ttgtggagga tatcgcaatg 5700 gggtatgttg tctctaactt cgagggtgtt agaatctcgt taagcaacgt gatggttgat 5760 ggtgttcaat tgccgcctaa ggagaaggct cctgatgtag gtgtattgtt tggattgaag 5820 gctgaaaatg tcattgtagg tttagtggtg cagatcgatc atgtaagaat gtcaacgaag 5880 ttcaagttga ggagaaaaat ggtgtatagc ttctctttgg aatgcacaat ggatgtagga 5940 gatatccaga acaaagaggt cattttgaag gtggtggcag tcgatcagtc tgtgtctggg 6000 tcaggaggaa accatatgct gctggatggt gtgccagtta ttgcaagcct cccattattt 6060 actgggcagg ccagttttga tttggctgca atgttaattg agtcaaattt agctggttca 6120 aatgacaatt tcttaatgag caatgttacc ttggatttag gtggattttc cccagagttg 6180 agtgacaaat attcctacag gctctcggga cctgaaaacc aagaagaccc gttggttctg 6240 aaggatggtg ccttctatgt gggaggtgag agactgtcca catataaagt agagcttaca 6300 ggtgaccttg tggtgaaagc attgggggcc ctagaagatg atgagggtgt tgtttctatg 6360 ctgcatcaac tgtggcctta tttgaaagca acatcacagg ttattttgtt tcaacaggaa 6420 gacttcacta ttgttcatga tttgtacaag atacagctca caaaatcaat tgaaagcttt 6480 ggtgaatgga tcgaattcac caactttaag gttgcctata gcaaatcact caaagagctt 6540 gtgatatcag acacccaagg gtcattcaga ctgaagggtg tgatgtgtag acccctggca 6600 aacacgctcc aggtggaaga catcgagtga 6630 // |
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