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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAS95810; SV 1; linear; genomic DNA; STD; PRO; 1056 BP.
XX
PA   AE017285.1
XX
DE   Desulfovibrio vulgaris str. Hildenborough selenide, water dikinase,
DE   selenocysteine-containing
XX
OS   Desulfovibrio vulgaris str. Hildenborough
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
OC   Desulfovibrionaceae; Desulfovibrio.
OX   NCBI_TaxID=882;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1056
FT                   /organism="Desulfovibrio vulgaris str. Hildenborough"
FT                   /sub_species="vulgaris"
FT                   /strain="Hildenborough"
FT                   /mol_type="genomic DNA"
FT   CDS             AE017285.1:1408431..1409486
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /transl_except=(pos:AE017285.1:1408473..1408475,aa:Sec)
FT                   /gene="selD"
FT                   /locus_tag="DVU_1332"
FT                   /old_locus_tag="DVU1332"
FT                   /product="selenide, water dikinase,
FT                   selenocysteine-containing"
FT                   /EC_number="2.7.9.3"
FT                   /note="selenoprotein; identified by similarity to
FT                   SP:P16456; match to protein family HMM PF00586; match to
FT                   protein family HMM PF02769; match to protein family HMM
FT                   TIGR00476; selenocysteine"
FT                   /db_xref="GOA:Q72CF1"
FT                   /db_xref="InterPro:IPR004536"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q72CF1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAS95810.1"
FT                   /translation="MTVDRLTSRSRAAGUAAKIAPGDLERILATLPRDPREGERVVVGT
FT                   RDNEDAAIVRVPGGKAIVQTLDFFTPIVDDPYLFGQIAAANALSDVYAMGGEPWCALNI
FT                   VCFPVKELPEDILADILRGGADKVREAGAVLVGGHSIEDESIKYGLSVTGIIDPDCYAT
FT                   NTGLRPGDVLLLTKPLGSGVLATAVKAGWDGFEAHEQELGRWGAMLNRAGGRVIRELGL
FT                   AAATDVTGFGLGGHLLEMANASNMSVHVDVSTLPLMPAVLDLVATGLLPAGSHANRHFC
FT                   SGNVSVHPEVDSLLVDIVFDAQTSGGLILAVPPHLVDDACSILRAEDAPFWRIGHVEEM
FT                   GEGVPRLVLQP"
XX
SQ   Sequence 1056 BP; 183 A; 302 C; 341 G; 230 T; 0 other; 183826250 CRC32;
     atgaccgttg accgcctcac atcgcgttcg cgcgccgccg gttgagcggc aaagattgct        60
     ccgggggacc tggagcgtat tcttgcgacg cttccccgcg acccgcggga aggggagagg       120
     gtggttgtag gtacgcgtga caatgaggac gcagcgattg tcagggtgcc gggcggcaaa       180
     gccatcgtcc agacccttga tttcttcaca cccatcgtcg acgacccgta tctgttcggg       240
     cagatagccg cagccaacgc cctttctgat gtctacgcca tgggagggga accgtggtgc       300
     gcgttgaata tcgtctgttt tcccgtgaag gaactgccgg aggatattct cgcagacatc       360
     ctgcggggcg gggccgacaa ggtgcgagag gccggcgctg ttcttgtcgg tggccatagc       420
     atcgaagatg agagcatcaa gtatggtctt tccgtcaccg gcatcatcga ccctgattgc       480
     tatgctacaa acacagggct tcgtcccgga gatgtgcttc tgctcaccaa gccccttggc       540
     agtggtgtgc ttgccacggc agtgaaggcc gggtgggatg gctttgaagc gcatgaacag       600
     gaacttggca ggtggggggc gatgctgaac agggcagggg gacgggtcat ccgcgaactt       660
     ggccttgccg ccgcaaccga cgtgaccggc ttcgggcttg gcggacacct gcttgaaatg       720
     gccaatgcct cgaacatgtc ggtgcatgtg gatgtctcga cgttgccact catgcccgcc       780
     gtgctggacc tcgttgctac cggcttgttg cctgcgggaa gccacgccaa caggcatttc       840
     tgttccggga atgtgtccgt gcatcccgaa gtcgattccc ttcttgtcga catcgtgttc       900
     gacgcgcaga cctcgggcgg gttgattctt gccgtgccgc cgcatcttgt tgatgacgcc       960
     tgttccatcc tgcgcgctga agatgccccc ttctggcgta tcggacatgt cgaagagatg      1020
     ggcgagggcg tgccgcgact cgtccttcag ccttga                                1056
//
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