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EBI DbfetchID AAQ21050; SV 1; linear; genomic RNA; STD; VRL; 2490 BP. XX PA AY277923.1 XX DE Avian rotavirus A VP3 XX OS Avian rotavirus A OC Viruses; dsRNA viruses; Reoviridae; Rotavirus; Rotavirus A. OX NCBI_TaxID=31563; XX FH Key Location/Qualifiers FH FT source 1..2490 FT /organism="Avian rotavirus A" FT /strain="CH2" FT /mol_type="genomic RNA" FT CDS AY277923.1:50..2539 FT /codon_start=1 FT /product="VP3" FT /db_xref="GOA:Q6WNV6" FT /db_xref="InterPro:IPR009697" FT /db_xref="UniProtKB/Swiss-Prot:Q6WNV6" FT /func_characterised="identical sequence" FT /protein_id="AAQ21050.1" FT /translation="MKVIALRRDLVSSYADTQVYEHDVDKDYYENAYLISNITAHNVLY FT VDYSIQVIEILNKSGIASLIAINKDKLEILIKSNYTYDYYKNIVYLHDYSYYNLNELRT FT DQYWLTTTNIEEYILPGWKLTYVGQLGIKTRGHYTYSFICQNTATDDDIIYDYIYSNEV FT DFLPFLLQALNKRLTTAVNFHRLSNRIFREYLYSKVPKDTINIGPRNESMFTLLRYPYI FT TNYAANEFKVSDLIRLTQEKWIGAENSQFDIGQFKNMCNVLSTIYYYYNKYHAYPRIYM FT LGSAPSYWLYDLLQVYNFDIETWDPLDTPFSKRHHKAMFAISDTEKLSDNSILYIDIRS FT DRNGADWREWRQRVEDETKINLEIMRKYLQRGKTRICCCKITAMDIELPATSILLHFPT FT TKIQSECYVICTQEMLQDKKRFVPKGAFYSFINNTKTDNVFVSPVYKVKPTNKFVVALY FT SLSNENNDRDKVIDFTQKQKRGIITLRMNNTFNYEYRLQFKSTYDYLYLPSEVSREGTI FT VTSYDGYIAMHNLSLSLESKATGNNHLFISFSDANYGQIDSYCTHMGISRRSHSVRFSE FT AATTLSGYMFRDITNGKFNLINTNVENAVSGHVYNALVYFRYNYRFDLLRWINLHAKDE FT VMIQGGRYYEHAPPELLYACQSALVFAKLQNDLTLIEYVNSVNRYILNKYNLKYADDPN FT YYIHIDFVDLPFKYTVPDPHLTGGLLFLNDFDIQNTITILRSVKEDLIALNLLTQYTYM FT LTDSIYVANVDGYLQFYYKLYMKFYRKQIVFGQSRMFLPHITLSKEKKKPVRIDATKLV FT IKSIKLRKIKSDVEYCI" XX SQ Sequence 2490 BP; 897 A; 372 C; 418 G; 803 T; 0 other; 1194840157 CRC32; atgaaagtga tagctttaag acgcgacctg gtctcatcat atgcagatac tcaagtctac 60 gaacatgacg ttgacaaaga ttattacgaa aacgcctatt taatttcaaa tataacggca 120 cataacgttt tatatgttga ctactcgata caagtaattg agatacttaa caaatcagga 180 attgcatcac ttatagctat caacaaagat aagctggaaa ttttaataaa atctaattat 240 acttatgact attataagaa tattgtttat ttgcatgatt attcatacta caacctgaat 300 gaattacgta ccgatcaata ttggttaaca actacaaata ttgaagaata tattttgcct 360 ggttggaagt tgacgtatgt cggtcaacta ggtattaaaa ctagaggtca ttatacctat 420 agctttatat gtcaaaatac tgctactgat gacgatatta tatatgatta catttattct 480 aatgaagttg attttttgcc ttttctgctt caagcattga ataaaagatt gactacagcg 540 gtgaatttcc acagactatc aaatagaata tttagagaat atttgtattc aaaagtgcca 600 aaagatacta ttaacattgg accaagaaat gaatccatgt tcacactgct tcgttatcca 660 tacataacga attatgcagc caatgaattt aaagtatctg acttaataag acttactcaa 720 gagaagtgga ttggagctga gaattcacaa tttgatattg gacagtttaa aaatatgtgc 780 aatgtgttat caaccatcta ttattactac aataaatatc atgcataccc tcggatatac 840 atgctcggtt cagcaccatc atattggctg tacgatttgt tgcaggtata taattttgac 900 attgaaacgt gggatccatt ggatacacca ttttcgaaac ggcatcataa agctatgttt 960 gcaatatccg acacagagaa actaagtgat aattcaatcc tttatattga tataaggtcg 1020 gatagaaatg gcgctgattg gagagaatgg agacagcgtg tagaagatga gacaaagatt 1080 aatttagaaa taatgcgtaa atacctgcaa cgtggaaaaa ccagaatttg ttgctgtaaa 1140 attactgcta tggatattga acttccagcc acatctatac tactacattt ccctacaaca 1200 aagatacagt cagaatgtta tgttatatgt acgcaagaaa tgttgcaaga taagaaaaga 1260 tttgtaccga aaggagcttt ttattcattt attaacaata ctaaaactga taatgttttt 1320 gttagtccgg tctataaggt aaagccaact aataagtttg ttgttgcact gtattcattg 1380 tcgaatgaga ataatgatag ggataaagta atagatttta cgcaaaaaca aaagagaggt 1440 atcatcacat taaggatgaa taatactttc aactatgaat acagattgca gttcaaatca 1500 acgtatgatt atttatattt gccatctgaa gtgtcacgtg aaggaactat agtcacgtca 1560 tatgatggat acatagcgat gcataatctt tctctatcat tagaaagtaa agctacagga 1620 aataatcact tatttatttc attttctgac gcgaactatg gtcagattga ttcatactgt 1680 actcatatgg gtatatcgag gagatcacac tcagtccggt tttcagaagc agctacaact 1740 ctgtccggtt acatgtttag agatataact aatggcaaat ttaatttaat taatacaaat 1800 gtagaaaatg cagtatctgg gcatgtttat aatgctttag tgtattttag atacaattac 1860 agatttgatt tattgagatg gataaattta catgcaaagg atgaagtcat gatacaggga 1920 ggtagatatt atgaacatgc tccaccagag ttattatatg catgtcaatc ggcattagta 1980 tttgcaaaat tgcaaaatga tttaacgcta atagaatatg tgaacagtgt aaatcgttat 2040 attttaaata aatacaatct taaatacgcc gatgatccga attactatat acatatcgat 2100 tttgttgatt tgccttttaa atatactgta cccgacccac acttgactgg aggattgttg 2160 tttttaaatg actttgacat tcaaaataca ataacaatat taagatcagt taaagaagat 2220 ttaatagcac tcaatttatt aactcaatac acatatatgt tgactgactc aatctatgta 2280 gcgaatgtcg atggctattt acaattctat tataagttat atatgaaatt ctatcgcaaa 2340 caaatagtat tcgggcagtc aaggatgttt ctgcctcata taactttatc taaagagaaa 2400 aagaaacctg tgcgtataga tgctactaaa cttgtaatta aatcaattaa attacggaaa 2460 attaaatcag acgttgagta ttgcatatag 2490 // |
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