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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAP85536; SV 1; linear; genomic DNA; STD; PLN; 1746 BP.
XX
PA   AY323935.1
XX
DE   Cichorium intybus (chicory) fructan 1-exohydrolase IIa
XX
OS   Cichorium intybus (chicory)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC   Cichorium.
OX   NCBI_TaxID=13427;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1746
FT                   /organism="Cichorium intybus"
FT                   /cultivar="Flash"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AY323935.1:1150..1327,AY323935.1:1591..1599,
FT                   AY323935.1:2689..3548,AY323935.1:4036..4194,
FT                   AY323935.1:4268..4509,AY323935.1:5178..5268,
FT                   AY323935.1:5355..5561)
FT                   /codon_start=1
FT                   /product="fructan 1-exohydrolase IIa"
FT                   /note="1-FEH IIa"
FT                   /db_xref="GOA:Q93X60"
FT                   /db_xref="InterPro:IPR018053"
FT                   /db_xref="PDB:1ST8"
FT                   /db_xref="UniProtKB/TrEMBL:Q93X60"
FT                   /protein_id="AAP85536.1"
FT                   /translation="MKKSLSSFIVLCFLVIILETGRVKATSRNLNDVIMLANQQIEQPY
FT                   RTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHL
FT                   DPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREW
FT                   VKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNW
FT                   KRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGHDWYTIGT
FT                   YSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADD
FT                   IEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIA
FT                   ASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQ
FT                   SAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHS
FT                   IIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQS
FT                   VKSAA"
XX
SQ   Sequence 1746 BP; 478 A; 371 C; 436 G; 461 T; 0 other; 3985004575 CRC32;
     atgaagaaat cactttcttc atttattgta ttatgttttc ttgtcatcat tctggaaact        60
     ggtcgggtaa aagcgaccag tcggaatctg aatgatgtga taatgctggc gaatcagcag       120
     attgaacagc cgtatagaac tggataccat tttcaacctc caagcaactg gatgaacgat       180
     cccaatggac caatgttata ccagggagtg taccatttct tctaccaata caatccgtat       240
     gcagcaacgt ttggtgacgt cataatctgg ggccacgccg tatcatacga cttagtcaac       300
     tggatccatc ttgacccggc aatttacccg acccaagaag ctgacagcaa gagttgctgg       360
     tcgggatccg ccaccatcct accggggaat attccggcca tgttgtacac cggcagcgat       420
     tcaaagtccc gtcaagtaca agaccttgcc tggcccaaaa acctctccga cccgttcctt       480
     cgtgaatggg tgaaacaccc gaaaaaccca ctcataaccc caccggaggg cgttaaagac       540
     gactgtttcc gtgacccgag caccgcctgg ctcggccccg acggcgtatg gaggatcgtc       600
     gtcggcggag accgtgacaa caacggtatg gcgtttttat accaaagtac cgatttcgtc       660
     aactggaaac gatacgacca gcctctttcg tcggcggatg ccaccggaac ttgggagtgc       720
     ccggactttt accctgtgcc gttgaacagc accaacgggc tcgatacgtc ggtgtacggc       780
     ggcagtgtga gacatgtaat gaaagcagga tttgaagggc atgattggta cacaattggg       840
     acttacagtc ctgatcgtga aaactttttg ccgcaaaatg ggttgagttt gaccggaagt       900
     acgttggatt tgaggtacga ttatggccaa ttttatgctt ccaaatcgtt cttcgatgat       960
     gccaagaaca gaagggtttt gtgggcgtgg gttcctgaaa ctgattctca agcagatgat      1020
     attgaaaaag gatgggctgg tcttcagtca ttcccaagag cactttggat cgacagaaat      1080
     gggaaacagt tgattcaatg gcctgttgag gagattgaag aacttcgtca aaatcaagtc      1140
     aaccttcaaa acaaaaacct taaacccggt tcggttcttg aaatccatgg gattgctgct      1200
     tctcaggcgg atgtgacaat ttcgttcaaa ttggaggggt tgaaagaggc agaggttttg      1260
     gatacgacgt tggttgatcc acaagcgctt tgtaacgaaa gaggtgcttc aagtcgtggt      1320
     gctcttgggc cttttggctt gttggctatg gcgtctaaag acttgaaaga acaaagtgca      1380
     atctttttta gggtttttca aaaccaactt ggacgatact ctgtgctcat gtgtagtgat      1440
     cttagcaggt ctactgttag aagcaatatc gacacgacaa gttatggtgc atttgttgac      1500
     atagatcctc ggtctgagga gatctcgcta agaaacttga ttgaccactc aattattgag      1560
     agtttcggag ctggtgggaa aacatgtatc acaagtcgga tttacccaaa atttgttaac      1620
     aatgaagagg ctcatctttt tgtgttcaat aatgggactc aaaatgtcaa aatttcggag      1680
     atgagtgctt ggagtatgaa gaatgctaaa tttgttgttg atcagagtgt aaaaagtgca      1740
     gcataa                                                                 1746
//
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