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EBI DbfetchID AAP44555; SV 2; linear; genomic RNA; STD; VRL; 6627 BP. XX PA AY216519.2 XX DE Cupixi virus L protein XX OS Cupixi virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. OX NCBI_TaxID=208899; XX FH Key Location/Qualifiers FH FT source 1..6627 FT /organism="Cupixi virus" FT /segment="L" FT /strain="BeAn 119303" FT /mol_type="genomic RNA" FT /country="Brazil" FT CDS AY216519.2:31..6657 FT /codon_start=1 FT /product="L protein" FT /note="polymerase" FT /db_xref="GOA:Q6XQH2" FT /db_xref="InterPro:IPR010453" FT /db_xref="UniProtKB/Swiss-Prot:Q6XQH2" FT /func_characterised="identical sequence" FT /protein_id="AAP44555.2" FT /translation="MDEKISSLKDFVRKQIPDRPEFFYQKEALLSQVEVSLILTEGFKL FT MSCLVEVESCEKNSCVHNSEQKFVDTILAENGIVGPTLPKVMPDGYRYFNKTLLLLEVF FT VRVRPDEFEKKWKSDMGKLLSLKDDLLRCGISLVPIVDGRCSYNTSIIPEWATERFRWL FT LIELLKESKEAMDFEIEDQEYQRLIHSLSRTCNQSLGFENIEQLKKVHLNYEDRLNEVI FT LAGLNSDLKESVIREELIKLKAWYKKEVFEKGHGNFVRTNQTSLLKTLQEIGSHAGTTV FT PECPMCCSKVFDLCYQMMLKIEGKESLNSSVSSDNNNPQISLVGREYLYVLSVCNKIKG FT KKIFNTRRNTLLFLDLIILNFVTEVFKKVPLGIQSLKVEGLIIGQMLLLTNDRALDILS FT ARRLLIKKIECNESWVKKCGDTLRRVEPSFWTSVCNYVKLPDFESLLLLAEVLCSDAPL FT LRYEPVQVEESHCTHKDFQLLNINQQDCLFECLSHISLSLINSMKTSFSSRLLINEKDY FT KRYFGTVRLKECYVQRFLFTEGKCGFLFYQKTGERSRCFSIYLSENGQLTELGSFYADP FT KRYFLPIFSGCVLRSMCSEMITWLDFDEELMHVVKPQLRSLVLSILCSPTKRAQNFLQG FT LRYFIMAFVNQAHHKQLMSKLIVECKSASDVLIQRLATKVFYTILTFGEDPGIHMTRKF FT KFLLNVSYLCHLITKETPDRLTDQIKCFEKFLEPKLEFGSVVVNPSLNGILDPKQEDNM FT LNGLEKLFSKSLYDVEDLKRPGISKDVLNYCLSLFTRGKLKVTGVLKTDPFKPSFTSTA FT LDLSSNKSVVVPKLDELGNIVSVYDKQKLISSCVASMAERFRTKGRFNLDPDTIDFLIM FT KNLTNLLSISGESPKASEELSLLYENLPEEITQVYDEIKNDIQVTLGKIGAKGSYKQKN FT GKEGKAGSPSNAETLESIWAPFGVLREIKIETSTHEIKDFDPGLLSMDIYEKLCTTVFE FT SSLKSSFFIDEVLSICPLELLLKNLTTKSFKENDFFECFKYILIQAGYDQRLGTYEHRS FT RARFGFREEVVRLRDDVRVSDRESNSEAIAKRLDRSFFTSAALRNLCFYSEESPTEYTC FT VSSNTGNMKFGLSYKEQVGSNRELYVGDLNTKMMTRLVEDFAEAVCNSMHYTCLNSESE FT FDRAICDMKMAVNNGDLCLSMDHSKWGPFMSPALFHRFLSGAKLKTMRLGDSVDTKPVL FT NVLKWHIHKVVEVPYNVAEAYCTGMLKRRLGLMSLQTQSISEAFFHQEIQTKKEVPSHI FT MSVLDMGQGILHNLSDLYGLISEQFLNYCLDFLYDAIPTSYTSSDDQITMIRMPQQSME FT TAEEGNADWLELLCFHDFLSSKLNKFVSPKTVCGTFAAEFKSRFFVMGEETPLLTKFVS FT AALHNVKCKTPSQLAETIDTICDQCVANGVGVSIVSEISKRVNRLIKYSGYPLNPFLAV FT ENQDVKDWVDGSRGYRLQRNIESCSIQESVLKQVRKFAKDVFLKIKRGQVFEEHLIQLI FT GADGDSAMEGFLSYVDCDKDKLREILEHRWLNLSANGDLRLVLRTKLMSSKRVLEKEQI FT PTLVKTLQSKLSKSFTKGAKKILAESINKSAFQASVASGFIGFCESVGSKCVRDGSGGF FT LYIREVVSKIISCQCTLCSANPGIIFCKNALSNVSNFSRPILWDYFSLVLTNACELGEW FT VFSPTKRPQQPNLLQNPNLFWAVKPKSVRLIEDQLGLGHVLQSIRRSYPKIFEEHLIPF FT MSDLQVNRTIDFTRLKYLDVCVAIDMMNENLGIVSHLLKRKDNSVYIVKQNECSVAHVR FT EVQYVDHDIGLSPQQVCTNFKLQLVLSSMISPLVISTSVLKSFFWYNEVLKLEDNSLID FT IGELTDFVILNKSYGVERVMYLEDMAMGYVVSSVDEPEIHLINAWVLTEHDVKKLESGS FT KVGDKDGKALAITLNIQFRHRRHSTKYHFTKGVVYSFTVEFQVPPSLQGPNLNTVPVRE FT MVLNASGMLGDHQSLDGVPLVASHPLMTGKKPIDLLTLLSESDIQISDDTGQLMAVYLD FT FSEFQSLIEDKYSFKIVGPERLDTPIILKGGVYMSEGKRLSTLMVELSGNVIVKALGAI FT ETDKEVGSLLLGLWPYIKTTGQKIKMDQNDFLLLYESHRELLLKSLEGLGGWLDFLDFS FT VCFSKSLSDLVISDNTGSLRLKGVTCRPIHNPRIVEDID" XX SQ Sequence 6627 BP; 2052 A; 1152 C; 1504 G; 1919 T; 0 other; 3125437544 CRC32; atggatgaaa agatctcctc tttgaaagat tttgttagaa aacagatacc tgatagacca 60 gagttcttct atcagaaaga agcactttta tctcaagtgg aggtcagcct catactcact 120 gagggtttca aactgatgtc atgcctggtt gaggtggaat cttgtgagaa aaattcctgt 180 gtgcacaaca gcgaacagaa gtttgttgac accattttgg cagagaatgg tatagtaggt 240 ccaacactgc caaaagtaat gccagatggt tacaggtatt ttaacaaaac tttgcttttg 300 ttggaggtct ttgttagagt gaggcctgac gaattcgaga agaagtggaa gtctgatatg 360 ggaaagctgc taagcttaaa ggatgatctg cttaggtgtg gaatttcact tgtgccaatt 420 gttgacggca ggtgcagcta caacactagt ataattccgg agtgggcaac agagcggttc 480 aggtggttac ttattgagct tctgaaagag tccaaagaag ccatggattt tgaaattgaa 540 gaccaagaat atcagagact aatccacagt ctgtccagaa catgcaatca aagtctggga 600 tttgaaaata tcgaacagtt aaaaaaggtt catctcaatt atgaagatag actcaatgaa 660 gtcatacttg caggtctcaa ctcagatctt aaagaatctg tgataagaga agaactaatt 720 aaactgaaag cctggtataa aaaagaggtg tttgaaaagg gacatgggaa ctttgtgaga 780 actaatcaga cttctttatt aaagactcta caggagatag gatcacatgc tggcacaact 840 gtgcctgaat gccctatgtg ttgtagtaaa gtttttgatt tatgctatca aatgatgctg 900 aagattgaag gaaaggagtc tctaaatagt agtgtgtctt cagacaacaa caatcctcag 960 atttctttgg ttgggaggga atatttatat gttctctcag tctgcaacaa gatcaaaggg 1020 aagaaaattt tcaacacgag aagaaatact ttactattct tagacttaat tatacttaat 1080 tttgtcaccg aagttttcaa aaaagtgccg ttggggatac aatctttgaa ggttgaagga 1140 ttgataattg gccaaatgtt gttgttaacc aatgataggg cacttgacat cctctcagct 1200 agaagattgc tcataaagaa aattgaatgt aatgaaagtt gggttaaaaa atgcggagac 1260 actctgagaa gagtggagcc ctctttttgg accagtgtgt gcaattatgt aaaattgcca 1320 gattttgaat ccctacttct attggcggag gttctatgct cagatgcacc tttactgagg 1380 tatgagcctg tgcaagtgga agaaagccat tgcacacaca aggactttca gttgctaaac 1440 attaatcaac aggactgtct ttttgaatgc ctatcacata tatctctctc attaatcaac 1500 tcaatgaaga cttccttctc atcaagactt ctaattaacg aaaaagatta caaaagatat 1560 tttggaaccg taaggctaaa agaatgttat gtgcaaagat tcctattcac agaggggaag 1620 tgtggtttcc tgttctatca gaaaaccgga gaaaggtcaa ggtgcttttc aatttattta 1680 tctgaaaacg gacagctcac agagttaggc tcattctatg ctgaccccaa gaggtatttt 1740 ctaccaatat tttctgggtg tgtgttacga tctatgtgtt cagagatgat cacatggtta 1800 gattttgatg aggaactaat gcatgttgtc aaacctcagc taaggtcctt ggtactaagt 1860 attctctgtt cacccacaaa aagggctcag aattttttgc agggtcttag atattttatc 1920 atggcatttg tgaaccaagc tcatcataag caattgatgt ctaaattaat tgtagaatgt 1980 aaatcagctt ctgatgtctt gatccagagg ttagctacca aagtctttta tacaatattg 2040 accttcgggg aggatcctgg gatccacatg acaaggaagt tcaaatttct tttgaatgtc 2100 agttatttat gccatttgat tacaaaagaa acccctgaca gactcactga tcaaataaaa 2160 tgttttgaga agtttttgga accgaagtta gagtttggca gtgttgttgt caacccgtca 2220 ctcaatggaa tcctggatcc aaaacaagaa gataacatgc tcaatgggtt ggaaaaactt 2280 ttctccaaaa gtctctatga tgttgaagac ctgaagaggc caggtatatc caaagatgtc 2340 ctaaattatt gtttatcgct tttcacccga ggcaaactga aagtgacagg tgtcttaaag 2400 acagatccat tcaagcccag tttcacaagt acagcgttgg acttatcaag caacaaaagt 2460 gttgttgtcc caaaattaga cgaattgggc aacattgtgt ctgtttatga caagcaaaaa 2520 ctcatttcct cctgtgtagc ctccatggca gaaaggttca gaactaaagg aaggttcaat 2580 ttggaccctg acacaattga cttcctaatt atgaagaact taaccaactt gctctcaatt 2640 agtggtgaga gtccaaaggc atcagaagaa ctttcattgc tttatgagaa cctacctgaa 2700 gaaatcaccc aagtctatga tgaaatcaag aatgacattc aggtaacctt ggggaaaatc 2760 ggagctaagg ggagctacaa acaaaagaat gggaaagagg gaaaagctgg atcccccagc 2820 aatgctgaga ctcttgagtc aatttgggca ccttttggag tgcttagaga gatcaagatt 2880 gaaacatcaa cccatgaaat caaggacttt gatcctggtc tgctgtccat ggatatttat 2940 gaaaagctgt gtacaacagt ttttgagtct tccttaaaat ccagtttttt tatagatgag 3000 gtcttaagta tatgcccact cgaattatta ttaaagaacc tgactacaaa gtcattcaag 3060 gaaaacgact tttttgagtg cttcaaatac attttaatac aagcaggtta tgaccagagg 3120 ctgggtacct atgagcacag aagtagggcc agatttggat ttagagaaga ggtggtaagg 3180 ttgagagatg atgttagggt gagtgataga gaaagcaatt ctgaagccat tgccaagcga 3240 cttgatagaa gtttttttac aagtgctgct ttgagaaatc tttgctttta ttcagaagaa 3300 tcacctactg agtatacatg tgtgagttct aatacaggca acatgaaatt tgggctcagt 3360 tataaagagc aggtagggtc taacagagaa ctgtatgttg gtgatttgaa tacaaaaatg 3420 atgactaggc tagttgagga ttttgctgag gctgtgtgca attctatgca ttacacgtgt 3480 ctcaattcag agtcagaatt tgatagggca atatgtgaca tgaagatggc agtgaacaat 3540 ggtgacctat gcctctcaat ggatcattca aaatgggggc ctttcatgag ccccgcactt 3600 ttccacagat ttttaagtgg ggccaaactg aaaaccatga gacttgggga cagtgtggat 3660 actaagcctg tattgaatgt tttgaaatgg cacatccata aggttgttga agtgccttac 3720 aatgtagctg aagcttactg cactgggatg ttgaaaagaa gattgggttt aatgagtctc 3780 caaactcaaa gtattagtga ggcattcttt catcaagaaa tccagacaaa aaaagaagtt 3840 cccagtcaca taatgtcagt actagatatg ggacaaggga tactccataa tttatctgac 3900 ttatatggct tgattagtga acagttcttg aattactgtt tagacttcct ctatgatgct 3960 atcccaacat cctacacctc aagtgatgat caaataacaa tgataaggat gcctcagcaa 4020 tctatggaga ctgcagaaga aggaaacgca gattggctgg agttgttatg tttccatgat 4080 ttcctatcat ctaaactcaa taagtttgta agccccaaga ctgtgtgtgg aacttttgct 4140 gctgagttta aatccaggtt ctttgtaatg ggtgaagaaa caccactttt gacaaagttt 4200 gtgtctgcag cacttcataa tgtgaagtgt aaaacccctt cccagctagc tgaaaccatt 4260 gacacaattt gtgatcaatg tgttgcaaat ggggttgggg tgagtattgt gtctgagatc 4320 tcaaaaagag tcaaccgtct gattaagtat tccgggtacc ccttgaaccc ctttctcgct 4380 gtggaaaacc aggatgtgaa ggattgggtg gatggatcta gagggtaccg tttgcaaagg 4440 aacattgaga gctgttccat tcaggaatca gtactcaaac aggtgagaaa attcgcaaag 4500 gatgtgttcc tgaaaataaa aagaggacag gtttttgagg aacacctaat acagttaatt 4560 ggtgctgatg gtgacagtgc catggagggt ttcttatctt atgttgactg tgacaaggac 4620 aaacttagag agatactcga gcaccgttgg ttgaatctct cagccaatgg agatttgaga 4680 ctcgttttga gaacaaagtt gatgtctagc aaaagagtat tagaaaaaga acaaatccca 4740 acattggtga aaacacttca atcaaagctt tccaaaagct ttacgaaggg tgctaaaaag 4800 atattggctg aatcaataaa caaatcagcc ttccaggcat cagtcgcttc aggattcatt 4860 gggttctgtg agagtgtcgg aagcaagtgt gttagagatg gcagtggagg attcttatac 4920 attagagagg tggtgagtaa aataattagc tgccagtgca ccttatgttc agcaaaccca 4980 ggaatcatct tttgcaaaaa tgcattgtct aatgtgtcca atttttcaag accaatcttg 5040 tgggattact tctctcttgt tttaacaaat gcttgtgaac taggggagtg ggtgttttct 5100 cctaccaaaa ggcctcaaca gccaaattta ctacaaaacc ctaacctctt ttgggctgtg 5160 aaacccaaga gtgtccgcct tatagaagat cagttaggct taggacatgt attgcagtcg 5220 ataaggagaa gttatcccaa aatttttgaa gaacacctga ttccgtttat gagtgaccta 5280 caggtgaata ggacaattga ttttactaga ttgaagtatc tggatgtatg tgtggctatc 5340 gacatgatga atgaaaattt ggggattgtg tcacacctgc tgaaaagaaa agataattca 5400 gtttatattg tcaaacagaa tgagtgttcc gttgcacatg tgagagaggt gcaatatgtt 5460 gaccatgaca ttggcctaag ccctcaacag gtttgcacta attttaagct ccagttagtg 5520 ttatcctcta tgataagtcc ccttgtaata agcacctcag ttctaaaaag cttcttttgg 5580 tataatgaag ttctaaagtt agaggataac agtttgattg acattggtga actcacagac 5640 tttgttatct tgaacaaaag ctatggtgtg gagagggtca tgtatctgga agacatggca 5700 atgggatatg ttgtctctag tgttgatgag cctgagattc acttgattaa tgcttgggtc 5760 ctcactgaac atgatgtcaa aaagctagaa tcaggctcca aggtagggga caaagatggc 5820 aaggcactgg ccatcactct caacattcag tttagacata ggaggcactc aacaaagtat 5880 cattttacca aaggtgttgt atattcattc acagtggagt tccaggttcc tccctcactt 5940 cagggtccaa atctgaacac tgtgcctgtg agggagatgg tgttgaacgc atcagggatg 6000 ttgggggacc accagtctct ggatggggtt cctctggttg cgtctcaccc tcttatgacc 6060 gggaaaaaac ctattgattt gctaacctta ttgtcagaga gtgatattca aatctctgac 6120 gacacaggtc aactgatggc tgtgtacttg gatttcagtg aatttcaatc actgattgag 6180 gacaagtatt cttttaaaat tgtggggcct gagagattgg acactccaat tatactaaag 6240 ggaggggttt atatgtctga aggtaagagg ctatcaacct taatggttga actttcaggt 6300 aatgtgattg tcaaagcatt gggtgctata gaaacagaca aagaggttgg gagtctgctg 6360 ctcggcctat ggccctacat caaaaccact ggtcagaaga tcaaaatgga tcaaaatgac 6420 tttctgcttt tgtatgagtc acatagggaa cttcttctta aatcacttga gggattgggt 6480 gggtggctag atttcttgga tttcagtgtg tgtttcagca agagtctctc agatctggtt 6540 atatctgaca acactggcag tctgagactg aagggtgtca cttgcagacc catccacaac 6600 ccgaggattg tggaggacat cgactaa 6627 // |
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