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EBI DbfetchID AAP44542; SV 2; linear; genomic RNA; STD; VRL; 6639 BP. XX PA AY216506.2 XX DE Sabia virus L protein XX OS Sabia virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. OX NCBI_TaxID=45709; XX FH Key Location/Qualifiers FH FT source 1..6639 FT /organism="Sabia virus" FT /segment="L" FT /strain="SPH114202" FT /mol_type="genomic RNA" FT /country="Brazil" FT CDS AY216506.2:48..6686 FT /codon_start=1 FT /product="L protein" FT /note="polymerase" FT /db_xref="GOA:Q6UY61" FT /db_xref="InterPro:IPR010453" FT /db_xref="UniProtKB/Swiss-Prot:Q6UY61" FT /func_characterised="similar sequence" FT /protein_id="AAP44542.2" FT /translation="MQDPLLGTLSELKDLVRKTIPDVIELAYQKDALLSQVHPRSVLIE FT GFKLLSLLVELESCKVNACHHNYEQKFIDVILSDGGILCPTLPKVVPDGYNLMGKTLIL FT LETFVRVNPDDFEKKWKADMSKLISLKTDLGKIGVTLVPVVDGRSNYNTSFVSDWTTER FT LRWLLIEVLKGMKTTSELEIEEQEYHRLIHSLAKTNNQSLGFENLECLKRNMLSYDQLL FT DSSLLVGVKNDVKESKVMEELIRLKIWYKSEVYEKGLGKFVKTDKKVLLSQLITLGSHE FT ENDSLDCAFCSSRILELCFKLSVKMHEDVLTRGLNLDGTKTLHSSVQSYLNVLSMCNKI FT KGSKIFNTRRNTLLFLDLIMLNFVVDEMVKDSTVIRNLKNAGLIVGQMILLVNDRVLDI FT LTANKLIRQKLTTNEKWLSICSSVLKRYDLELWEKLCYLIRVPDFNELFQLAKELVSDR FT PMMRYSVHKAEERQCCHKAMENFTDDDFKIMLKALSHLSLGLINSMKTSFSSRLLINER FT DYSRYFGNVRLRECYIQRFPITNNIIGLLFYQKTGERSRCYSLYIAENGELTEIGSFYC FT DPKRYFVPIFSEAVITSMCEEMINWLNFDSELVRIVSTQLKTLMLLLLCSPSKRNQTFL FT QGLRYFIMAYVNQAHHIDLMSKLAVECKSSSEIQLQRLCVRLFVSILSGDNEIEYGFTR FT RFKFLLNISYLCHFITKETPDRLTDQIKCFEKFLEPKLKFNSVIVNPSLNGTLTESQEH FT QMISSIDRFFSKELLDQSDVKEPGVSRELLGYCVSLFNRGKLRVSGDLKVDPFRPTFTS FT TALDISSNKSVVVPKLDELGNIVDKYNKQLMVSSCVTSLVEMFKTKGRYNLDPDSIDFL FT VLKNLTNLVSANVPQEKSQEELSTLYEALTEDQISAFEQVRDEVQLALHKMKSSDAREE FT RLQDPKRNEKNASKGKILESLWSPHQVNRAIKNEASIHEIKDFDPDILDSHLVEKLCHE FT VYNSSQKSLFFLDEPLKSVPLEMLLINLTTIAYEEEEFFECFKYLLIQGDFDQKLGTYE FT HKSRSRLGLSSEALKVQENARVSTRESNAEAIAKKLDRTFFTSAALRNLCFYSEDSPTE FT FTSVSTNTGNLKFGLSYKEQVGSNRELYVGDLNTKLMTRLVEDFSEVVTGSMRFSCLNS FT EKEFERAICDMKMAVNNGDFSLSMDHSKWGPHMSPALFFTFLANLNLTEPKSRTRLNLD FT PLLNILKWHLHKTVEVPFNVAQAYCIGKLKRSLGLMECQCSSLTEEFYHSYLQIQDEIP FT SHIMSVLDMGQGILHNLSDLYALITEQFLNYVIHKLFDIDVTSYTSSDDQISIMKLPLS FT TKENDEDFDWLEIICFHEYLSSKLNKFVSPKSVVGNFVAEFKSRFFVMGEETPLLTKFV FT AAALHNVKCKTPTQLAETIDTICDQCVANGVGVDIVSRISERVNRLISYSGYKETPFLT FT IVNQDVKDWTDGSRGYRLQRNIENSFGNQELLRLIRRGARKVFLEIKKGHVFEENLIGL FT IGRGGDEALRGFLLYAGFAENDIVEALRHKWLNPSTFGDLRLVLRTKIMSSKRILERES FT VPSLIKTLQSRMSKNFIKGAKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGKGG FT FMYLKELYNNVNKCGCCICLEWPGVVYCQDSLAKISQFARSILWDYFTLVLTNACEIGE FT WVFSDVKSPSAPPILSNPNLFWAVKPKIQKHIEDRLSLNHILHSIKRNYPYLFEEHLAP FT FMSDLQFNQMMNPSHVKFLDVCIALDMMNENLGIIGHLLRGRNHFIYIVKQSECASAHI FT RQSDYVDHELGLSPQQVCYNFKVQFLFSSMIDPLIVSTSTLKTFFWFNEVLSIEEEDQI FT DLGELTDFTLFIKTGHLNRAMTADDITMGYVCSNLAEEIITLNSYGSFQEFRSNHPSKN FT DLSDILKTLTSESIKLTLDIQIVHMRNSTKYNISRKIVYTLKALCALPLEDCFTKDPVA FT LVESLELFASGVNGGHLQLDGVTMVSVLPLLRGKKAVNLAQILMDNDLAATNDHNVMES FT VTLDFTKFHDELGDKFCYSLVGPEDQGNPIVLHNGMFMIDNQKLSYLKVEIFGDTIIKA FT LGALDSPREIGSLLHGLWPYLKATKQIINFDQTDFEMIYDLHRVVLLESIAQFGDWVEF FT ASFKVAFSKHYKDIVVADNLGNLRLKGVTCRLFRQQQSVEDIE" XX SQ Sequence 6639 BP; 2131 A; 1062 C; 1418 G; 2028 T; 0 other; 4256059812 CRC32; atgcaagacc ccctcttagg aaccctgtct gaattaaagg atttggttag aaaaaccata 60 ccagatgtaa ttgagcttgc atatcaaaag gacgcattac tttcacaagt gcatccaaga 120 tcagtgttaa ttgaggggtt taaactttta tctttgttgg tggagttgga gtcctgtaag 180 gtaaatgcat gccatcataa ttacgaacaa aaatttatag atgtgattct ttccgatggt 240 ggcattctct gtccaactct gcctaaggtg gtgccagatg gttacaacct gatgggaaag 300 actctcatct tgttggagac ttttgttaga gtaaatccag acgactttga aaagaaatgg 360 aaggctgata tgagcaaatt aatctctcta aaaacagacc taggcaagat aggtgttaca 420 ttagtccccg ttgtagatgg ccgcagcaat tacaatacca gcttcgtgtc tgattggacc 480 acagaaaggt tgaggtggtt gttaatagag gtgttgaaag gtatgaagac tacttcagaa 540 ctagaaattg aagaacaaga atatcataga ttaatccata gtttggccaa gaccaacaat 600 caaagccttg gttttgaaaa tcttgaatgt ctcaagagga atatgttatc ctatgatcag 660 ttgctggatt cctcattgtt agttggagtt aagaatgatg tgaaagaatc aaaagtgatg 720 gaggagctta taagattgaa aatttggtac aaaagtgaag tttatgagaa aggtttggga 780 aagtttgtga aaacagacaa aaaggtcctg ctgtctcagt taatcacatt aggctcccat 840 gaggagaatg atagcctaga ctgtgccttt tgttcctcta gaattttgga gttgtgtttc 900 aaattatcag tcaagatgca tgaggatgtg ctcacaaggg ggctgaacct tgatgggact 960 aaaactttac actcatcagt gcaatcttac ctgaatgtgt tgtccatgtg caataagatt 1020 aaaggttcaa agatctttaa taccaggagg aacacactat tgtttttaga cttaatcatg 1080 ttgaacttcg ttgttgatga gatggtaaaa gatagcacag ttatcaggaa cctaaagaat 1140 gcaggattaa tagttggaca aatgatatta cttgtcaatg atcgggtgtt ggacatcctc 1200 actgctaata agttgatcag gcaaaaactg accaccaatg aaaagtggct ttcaatttgt 1260 agcagtgttc ttaaaaggta tgatttagag ctctgggaaa agctgtgtta tttaataaga 1320 gttcctgact ttaatgaact tttccaactc gcaaaggagt tagtctcaga caggcctatg 1380 atgaggtatt ctgttcacaa agcagaggaa cgacaatgtt gccataaagc aatggagaac 1440 ttcactgacg atgacttcaa gataatgtta aaggccttgt ctcatctttc attaggcttg 1500 atcaattcaa tgaagacatc attttcctct cggttactta ttaatgagag agattattca 1560 cgatattttg gtaatgtgag acttagggaa tgttatatcc aacgattccc tatcacaaac 1620 aacataatag gtttactgtt ttaccaaaag acaggagaaa gatctagatg ttactcactt 1680 tatattgcag aaaatggtga gttgactgag atcggatctt tttactgtga tcctaaaaga 1740 tactttgtgc ctattttttc tgaagctgtg atcacatcaa tgtgtgaaga aatgatcaac 1800 tggttgaact ttgattcaga gttggtgaga atagtatcca ctcaattaaa aacactcatg 1860 ttactactgc tctgttctcc ttcgaagaga aatcagacat tccttcaagg tttgaggtat 1920 tttataatgg catatgtcaa ccaagcacac cacattgacc ttatgtctaa gttggcagtt 1980 gagtgtaagt ctagctcaga aatccaattg caaagattat gtgtcagatt gtttgtttcg 2040 attttatctg gtgacaatga gatagaatat gggttcacaa gaagattcaa gtttctactg 2100 aacattagtt acctttgcca ctttattaca aaagaaactc cagataggct aacagatcaa 2160 attaaatgtt ttgagaaatt cttggaaccc aaattgaaat ttaatagtgt cattgtgaat 2220 ccgtcattga acggaacctt gacagaatct caggagcacc aaatgatttc tagtattgat 2280 agattctttt ccaaagagtt gcttgatcaa tctgatgtga aggagcctgg tgtctctaga 2340 gaactacttg gatactgtgt ttcattgttc aatagaggca aattgagagt gtcaggggat 2400 ttgaaagtag atccctttcg tcctactttc acaagtactg ctttagacat ctcgagcaat 2460 aaaagtgttg ttgtcccaaa attagatgaa cttggaaata ttgtagataa atataataaa 2520 cagttaatgg tatcatcatg tgtcacatca cttgtagaaa tgtttaagac caaaggtagg 2580 tacaatttag atcctgattc tattgatttc cttgtgttaa aaaacctcac aaacttggta 2640 agtgcaaatg tacctcaaga aaagtctcaa gaagaattgt caacattgta tgaagcactg 2700 actgaggacc aaatttctgc attcgaacag gtgagggatg aagtacagtt agcattacac 2760 aaaatgaaaa gttcagatgc tagagaagaa aggttgcagg atccaaaaag aaatgagaag 2820 aatgcttcaa aagggaagat actggaatct ctttggtcac ctcatcaggt aaacagagcc 2880 ataaaaaatg aggcctcaat ccatgaaatt aaagattttg atcctgacat tttagatagt 2940 catcttgttg aaaaactttg tcatgaggtg tataattcat cacaaaagtc actgtttttc 3000 cttgatgaac cgttaaaatc tgttccattg gaaatgttgt tgatcaattt aactaccata 3060 gcctatgaag aggaagagtt ctttgagtgt tttaagtacc tattaataca aggagacttt 3120 gatcaaaagc taggtacata tgaacacaag agtagatcaa gattagggct gagttcagag 3180 gcacttaagg tacaagagaa tgcaagagtt agcacaagag aaagcaatgc tgaggcaata 3240 gcaaaaaaac ttgatagaac tttctttaca agtgcagctt tacgaaatct ttgcttttac 3300 tcagaagatt ccccaactga attcactagt gtaagcacca acactggcaa tctgaaattt 3360 gggttaagtt ataaagaaca ggttgggtct aacagggagc tttatgtggg agatcttaac 3420 actaagctta tgactagatt ggtagaggat ttctcagaag tggtcacagg atcaatgagg 3480 ttctcttgtt tgaattctga gaaggaattt gaaagggcaa tttgtgatat gaaaatggca 3540 gtaaacaatg gtgactttag tctttccatg gaccactcaa agtggggacc ccacatgagc 3600 cctgctctgt tttttacatt tttagccaat ttgaatctta ctgagcccaa gagtagaaca 3660 aggctgaacc ttgatccttt acttaatata ctgaagtggc acttacacaa aacagtagag 3720 gttcctttta atgttgcaca ggcttactgt atagggaagc ttaaaagaag tcttgggttg 3780 atggaatgtc agtgttcaag tctcacagag gaattttatc atagctacct tcagattcaa 3840 gatgaaatcc caagtcatat aatgtctgta cttgacatgg gccaaggcat attacacaat 3900 ttgtcagact tgtatgcatt aataactgaa caattcctta attatgtaat acacaaactg 3960 tttgatattg atgtcacttc ttacacatct agtgatgacc aaatttcaat catgaaattg 4020 ccactgagta caaaagaaaa tgatgaagat tttgactggt tggaaatcat ctgtttccat 4080 gagtacctat cttcaaaatt gaacaaattt gtaagtccaa agagtgtggt ggggaatttt 4140 gttgctgagt tcaaatcgag attttttgta atgggtgagg aaactccctt gttgaccaag 4200 tttgtggccg cagcattaca taatgtgaag tgtaaaacac caactcaatt agcagagact 4260 attgatacca tttgtgatca gtgtgtggcc aatggtgtag gagtggatat tgtctcaaga 4320 atatcagaga gggtgaatcg attgattagc tattctggct ataaagagac gcctttcctg 4380 accattgtca accaagatgt caaagattgg acagatggat cgaggggtta tcgtctccag 4440 agaaatatag agaattcttt tggcaatcag gaactgcttc gtttgataag gaggggggca 4500 agaaaagtat ttttggaaat aaagaagggt catgtgtttg aagaaaattt gattggtttg 4560 attggcaggg ggggtgatga agctttaaga gggtttttat tgtatgcagg atttgctgaa 4620 aatgacattg ttgaggcttt aaggcataaa tggttgaatc cgtccacttt tggagatttg 4680 agactggttt taaggacaaa aattatgtct agtaaaagaa tcttggaaag agaaagtgta 4740 ccaagtctga taaagacact acaatccaga atgtcaaaga actttataaa gggggcaaaa 4800 aagattttag cagaatcaat aaataagtca gcatttcagt catctgtggc ctcaggtttc 4860 atagggttct gtaaaagtat gggtagtaaa tgtgtgagag acggcaaagg aggttttatg 4920 tatctgaaag aattgtacaa taatgtgaat aagtgtggat gctgtatatg tttggaatgg 4980 ccaggtgttg tttactgtca ggattctcta gcaaaaattt cacaatttgc aagatctatt 5040 ttatgggatt acttcacatt agttctcact aacgcatgtg aaatcggaga atgggttttc 5100 tctgatgtga aatctccttc tgcacctcct attttaagta atccaaatct cttttgggct 5160 gtcaagccca agattcaaaa acatattgaa gatagactaa gtctaaatca tattttacac 5220 tctattaaaa ggaactatcc ctatttattt gaagaacatc tagcaccgtt tatgagtgat 5280 ttgcaattca atcagatgat gaacccatca catgtcaaat tcctggatgt atgtatagca 5340 ttggatatga tgaatgagaa tctaggcata ataggtcatc ttttgcgtgg tagaaatcat 5400 ttcatataca tagttaaaca gagtgagtgt gcttctgcac acataaggca atctgactat 5460 gtggaccatg agcttggttt aagtcctcag caagtttgct acaattttaa agttcaattt 5520 ttgttttctt cgatgattga tcccctcata gtttctacgt caacattaaa gacatttttc 5580 tggtttaatg aggttttaag tatagaggaa gaagatcaga tagatttggg agaattgact 5640 gacttcacat tgtttataaa aacagggcat ctgaataggg ccatgacagc tgatgacata 5700 acaatgggtt atgtgtgttc caacctcgca gaagaaataa tcacactgaa ttcctatgga 5760 tcattccaag aattcagatc aaatcatcca tccaagaatg atttatcaga catcttaaag 5820 actctcacta gtgaatcaat aaaactcaca ttagacatac aaattgtcca tatgagaaat 5880 tctactaagt acaacattag taggaagatt gtttatactc ttaaggcact ctgtgctcta 5940 ccacttgagg actgcttcac taaagaccca gtggctttgg tggaatcctt ggagttgttt 6000 gcttctggtg taaatggagg acacctgcag ttggatggtg taaccatggt ttcagttttg 6060 cctttgctga gagggaagaa ggcagtgaat ttagctcaga ttctaatgga taacgattta 6120 gctgcgacca atgatcacaa tgtgatggaa tctgtaacac ttgatttcac caaatttcat 6180 gatgaactag gtgacaaatt ctgctactca ttagttggtc ctgaggacca gggcaatcca 6240 attgtcctcc acaacggcat gtttatgatt gataatcaga agttgtctta cttaaaggtg 6300 gagatttttg gtgacaccat aattaaggca cttggggcac tggacagccc cagggagatt 6360 gggagtcttc tacatgggct ctggccttat ctgaaggcta ccaagcaaat cattaatttt 6420 gatcaaacag actttgaaat gatttatgat cttcacagag ttgttttgtt ggaatcaatt 6480 gctcagtttg gagattgggt tgaatttgcc agttttaagg ttgcattcag caaacattac 6540 aaagacattg ttgttgctga taatctagga aacttaaggc tcaagggtgt tacctgcaga 6600 ctatttagac agcagcagtc cgttgaagac attgagtaa 6639 // |
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