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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAP05489; SV 1; linear; genomic DNA; STD; PRO; 1383 BP.
XX
PA   AE015925.1
XX
DE   Chlamydophila caviae GPIC fumarate hydratase, class II
XX
OS   Chlamydophila caviae GPIC
OC   Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
OX   NCBI_TaxID=227941;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1383
FT                   /organism="Chlamydophila caviae GPIC"
FT                   /isolate="GPIC"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AE015925.1:857125..858507)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="fumC"
FT                   /locus_tag="CCA_00748"
FT                   /old_locus_tag="CCA00748"
FT                   /product="fumarate hydratase, class II"
FT                   /note="identified by match to PFAM protein family HMM
FT                   PF02504"
FT                   /db_xref="GOA:Q822D5"
FT                   /db_xref="HSSP:1FUQ"
FT                   /db_xref="InterPro:IPR000362"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q822D5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAP05489.1"
FT                   /translation="MRQENDSLGIVEVPEDKLYGAQTARSQKYFSWAPEVMPKEVIRAL
FT                   VLIKQCAAKANHDLGFLDSKYCDMIVSAASEILEGGFEEHFPLKVWQTGSGTQSNMNVN
FT                   EVIANLAIQRHGGVVGSKTPIHPNDHVNKSQSSNDVFPTAMHIAAVINLKKKLIPAMDH
FT                   LQRALDAKVAEFRDCVKIGRTHLMDAVPMTLGQEFSGYSNQIRQSLERVAFSLTHMYEL
FT                   AIGGTAVGTGLNVPNGFIDKVIHYLRQETGEPFVAASNYFSALSNHDTLVNAHGVLATL
FT                   ACALTKIATDLSFLGSGPRCGLGELLFPENEPGSSIMPGKINPTQCEALQMVCAQVIGN
FT                   NQAVIMGGSRGNFELNVMKPVIIYNFLQSVDILAGGMQAFADYFVSGLRVNKPRLKEYL
FT                   DNSLMLVTALTPVLGYDKCSKMALKAFHDNINLKEACIQMGYLSAEEFDRLVVPESMVG
FT                   KF"
XX
SQ   Sequence 1383 BP; 398 A; 225 C; 320 G; 440 T; 0 other; 2612330118 CRC32;
     atgcggcaag aaaatgatag tttaggaatt gtagaagtcc ctgaagataa gttgtatggt        60
     gcgcagacag cgcgctctca aaaatatttt tcttgggctc ctgaggttat gcctaaagaa       120
     gttattcgag ctttagtttt gatcaaacaa tgtgctgcta aagccaacca tgatctaggg       180
     tttttagatt caaaatattg tgacatgatt gtttctgctg cttctgagat tcttgaaggc       240
     ggatttgagg agcattttcc tttaaaggta tggcaaacgg gcagcggcac gcaatccaac       300
     atgaatgtaa atgaggttat tgctaattta gctattcaac gtcatggagg ggttgtaggt       360
     agtaaaacac cgatacatcc taatgatcat gtcaataaat cccaatcttc gaatgatgtt       420
     ttccctacag ctatgcatat tgctgcggtg attaatctga agaaaaagct cattcccgct       480
     atggatcatt tgcaaagggc attagatgct aaggtagctg aatttcgtga ctgcgtaaag       540
     ataggaagaa cacatttaat ggatgctgtt cctatgacat taggacagga gttttctggt       600
     tatagtaatc agatacgtca atccttagag agggtagcgt tttcccttac gcatatgtat       660
     gagttagcta tagggggaac tgcagtaggt acgggattga atgttcctaa tggatttata       720
     gataaagtga tccactattt gcgtcaggaa accggagagc ctttcgttgc tgcatcgaat       780
     tatttctcag cattatctaa ccacgatacg ttagtaaatg ctcatggtgt tttagctact       840
     ttagcttgtg ctttaacaaa gatagctacg gatctaagct ttttaggatc tggtcctcgg       900
     tgtggtttag gagagttgct atttcctgag aatgagccgg gatcttcaat aatgccgggg       960
     aagatcaatc ctacacagtg cgaagctttg caaatggttt gtgctcaggt tatagggaat      1020
     aaccaagcag taatcatggg gggaagtcga ggaaattttg aactcaatgt gatgaaacct      1080
     gtaataattt ataacttttt acaatctgtg gatattcttg cgggaggtat gcaggctttt      1140
     gcagattact ttgtttcagg tttgcgtgtg aataaacctc gtcttaaaga gtatttggat      1200
     aactctttaa tgcttgttac agctttaact ccagttttag gatatgataa atgctcgaaa      1260
     atggctttaa aagctttcca tgacaatatt aatttaaaag aagcctgtat acaaatgggt      1320
     tatctatctg cagaagagtt tgaccgcctt gttgttcccg aatctatggt gggaaaattt      1380
     taa                                                                    1383
//
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