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EBI DbfetchID AAO85274; SV 1; linear; genomic DNA; STD; INV; 2211 BP. XX PA AY241925.1 XX DE Caenorhabditis elegans chondroitin disaccharide polymerase XX OS Caenorhabditis elegans OC Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; OC Rhabditidae; Peloderinae; Caenorhabditis. OX NCBI_TaxID=6239; XX FH Key Location/Qualifiers FH FT source 1..2211 FT /organism="Caenorhabditis elegans" FT /chromosome="I" FT /mol_type="genomic DNA" FT CDS join(AY241925.1:394..402,AY241925.1:1278..1960, FT AY241925.1:2400..2883,AY241925.1:3132..3559, FT AY241925.1:3760..4105,AY241925.1:4156..4233, FT AY241925.1:4748..4930) FT /codon_start=1 FT /gene="sqv-5" FT /product="chondroitin disaccharide polymerase" FT /note="GalNAcT-I, GlcAT-II, GalNAcT-II in chondroitin FT backbone polymerization; SQV-5; alternatively spliced long FT form" FT /db_xref="GOA:Q7Z1Z1" FT /db_xref="InterPro:IPR008428" FT /db_xref="UniProtKB/TrEMBL:Q7Z1Z1" FT /protein_id="AAO85274.1" FT /translation="MRVFQRSTCRMPVSRATVTILLGILFGFSITYYLTALKSLTNPII FT CGPEQQIGGFDYLDVISQRADADVFTRSQSLPGHRRGLILVAIMTAAKYVDTRAYNVWK FT TWAQHIPGRVLIFVAEGTESVHEDMPLIRLKGVDDTYPPQKKSFAMVKWLAENMADEYD FT WFLRADDDLYIRGEELALFLRSVDSSKAHIIGQAGLGNSAEYGLLALGSTDNYCMGGPG FT IVMSRDTLLKVSPHLESCLQHMLTSHEDVELGRCIRKHVGVACTWNYEMQKLFHNNQSA FT IKESYAKNMKELKDAITLHPIKDPAVMRKVHLRNREIKLREARAKRSLLSSELSTAKAQ FT TLVRMTPNRTNDLTPWEYINNNKILFCADRVNCPRHTVDLSIRTEMADTITQLFDEFNT FT NARQRGRVLQFQSLQYGYMRVEPTKGVDYVLDMLLWFKKFRPPNRTTISVRRHAYVQQT FT FGKLRSLSEGVFRSNMRANSTLIEDPTLHMIMPLRGRAAIFARFAQHLKSICARGGDDL FT AVSLTIVLYSSEDEMENRETIEMLRASFIPVTVIEMGDVSFSRGVALMRGAETLPANAL FT LFFTDVDMLFTCDALKRIKSNTILNAQIYFPIVFSEFSHESWSENDKLLADAFHYGRGR FT GYFRHFGYGLAAMYKADLMDVGGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEPGLV FT HIYHPIHCDENMPTAQKDMCHGSKAASLASIDTLVEQIAQYT" XX SQ Sequence 2211 BP; 664 A; 431 C; 491 G; 625 T; 0 other; 721387514 CRC32; atgcgagtgt ttcagcggag cacatgcaga atgccggtct cccgagccac cgtcacaatc 60 ctactcggaa tcctgtttgg tttctcaatc acttactatc tgacggctct caaatctctg 120 acaaatccaa taatctgtgg cccagaacaa caaattggcg gtttcgatta tctcgatgtg 180 ataagtcaac gtgctgatgc tgatgttttc acaagatccc aaagtcttcc cggtcatcga 240 aggggtctga ttcttgtggc tattatgact gctgcaaaat acgttgatac acgtgcttat 300 aatgtttgga aaacatgggc tcaacacatt cccggacgag ttttaatatt tgttgccgaa 360 ggaactgaat cagtgcatga ggatatgcca ttaattcgtc tgaaaggagt tgatgatact 420 tatccaccac agaagaaaag tttcgcaatg gtaaaatggt tggcagagaa tatggctgat 480 gaatatgatt ggttcttgcg agcagacgac gacctctaca ttagaggaga agagctcgct 540 ttattcctaa gatctgtcga ttcatccaaa gctcatatca tcggacaggc tggacttggt 600 aacagtgcgg aatatggtct tctagctctt ggatctaccg ataattattg tatgggagga 660 cctggaattg ttatgagcag ggacacctta ttaaaagtat ctcctcatct cgaatcatgc 720 ctccaacaca tgctgacttc tcacgaggac gtcgaactcg ggcggtgtat tcgaaaacat 780 gtcggtgtag cttgcacgtg gaattatgaa atgcaaaagt tgttccataa taatcaaagt 840 gcaatcaagg agtcatatgc aaaaaatatg aaagaattga aagatgcaat tactcttcat 900 ccgattaaag atccagctgt aatgaggaag gttcatcttc gaaatcgaga aattaaactt 960 cgtgaagcac gagctaaacg aagtcttttg agttcggagc tcagtactgc aaaagcacag 1020 acattggtac gaatgacacc gaatagaacg aatgatttga caccatggga atatattaat 1080 aacaataaaa ttctgttttg tgcggatcgg gtcaattgtc ctcggcatac tgtagatttg 1140 agtattcgga cggaaatggc cgacactatc acacagttat tcgacgagtt caacacaaat 1200 gctcgccaaa gaggtcgtgt tcttcaattt caaagtcttc aatatggata catgcgtgtt 1260 gaacctacaa aaggagtcga ttatgttctt gacatgttac tttggttcaa aaagttccgt 1320 ccaccaaaca gaacaacaat ttccgttcga agacacgcgt atgttcaaca aacattcgga 1380 aaacttcgaa gtctctctga aggagtgttc cgatcaaata tgagagcaaa ctctacactt 1440 attgaagatc caacattgca tatgattatg ccattaagag gaagagctgc catatttgca 1500 agatttgctc aacatttgaa gagtatttgt gcgagaggag gagatgattt agctgtttca 1560 ttgacaattg tattatactc gagtgaagat gaaatggaga atagagaaac gattgaaatg 1620 ctccgtgcaa gcttcatccc agtaacagta atcgaaatgg gtgatgtttc attctcacgt 1680 ggtgttgctc ttatgcgtgg agctgaaact cttccagcca atgctcttct attctttact 1740 gatgttgata tgctattcac atgtgatgca ttgaaacgta taaaatcgaa tacaattctc 1800 aacgcacaaa tctacttccc gatcgttttt tctgaattct cacatgagag ttggtctgaa 1860 aatgacaagt tattggctga cgccttccat tatggacgtg gacgtggata ttttagacat 1920 tttggttatg gtctcgcagc gatgtacaag gcggatttga tggatgtcgg agggtttgac 1980 acaaagatcg aaggatgggg aaaggaagat gttgacttgt ttgagaaggc aatcaaaaac 2040 ggtcgtctcc gagtgattcg agtccctgaa cctggacttg ttcacatcta tcacccaatt 2100 cattgcgatg aaaatatgcc aactgctcaa aaggatatgt gccatggttc aaaagcagca 2160 agtcttgctt caattgatac acttgtcgag cagattgccc agtacacatg a 2211 // |
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