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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAO54761; SV 1; linear; genomic DNA; STD; PRO; 1137 BP.
XX
PA   AE016853.1
XX
DE   Pseudomonas syringae pv. tomato str. DC3000 alginate lyase
XX
OS   Pseudomonas syringae pv. tomato str. DC3000
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1137
FT                   /organism="Pseudomonas syringae pv. tomato str. DC3000"
FT                   /strain="DC3000"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AE016853.1:1356280..1357416)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="algL"
FT                   /locus_tag="PSPTO_1236"
FT                   /old_locus_tag="PSPTO1236"
FT                   /product="alginate lyase"
FT                   /db_xref="GOA:Q887Q5"
FT                   /db_xref="InterPro:IPR008397"
FT                   /db_xref="InterPro:IPR008929"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q887Q5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAO54761.1"
FT                   /translation="MQTPKLIRPTLLSMAIVSSMAWATGASAALVPPKGYDAPIEKMKT
FT                   GDHNFTCEAIPKPYTDKLVFRSKYEGSDKARATLNAVSEEAFRDATKDITTLERGVSKV
FT                   VMQYMRDGRPEQLDCALNMMTTWAKADALESREFNHTGKSMRKWALGSMSSAYLRLKFS
FT                   DSHPLANRQQDAQIIEAWFSKLADQVVSDWSNLPLEKINNHSYWAAWSVMSTAVVTNRK
FT                   DLFDWAVKEFKVAANQVDKDGYLPNEMKRRQRALSYHNYALPPLAMIASFAQANGVDLR
FT                   PENNGALKRLGDRVLAGVKDPASFAEHNGEKQDMTDLKKDPKFAWLEPYCSLYTCSPDV
FT                   LEDKHEKQPFKTFRLGGDLTKVYDPTHEKGDKGDNDGS"
XX
SQ   Sequence 1137 BP; 275 A; 336 C; 320 G; 206 T; 0 other; 2734319401 CRC32;
     atgcagactc cgaaactgat acgccctacc ctgctgtcga tggcaatagt gtcatcgatg        60
     gcctgggcta cgggtgcgtc cgccgcactg gttccaccca agggctatga tgccccgatc       120
     gaaaagatga agaccggcga tcacaatttc acctgtgaag ccattcccaa gccttacacc       180
     gacaagctgg ttttccgcag caagtacgaa ggttcggaca aggcgcgcgc gacactcaat       240
     gcagtgtccg aagaagcttt tcgtgacgcg accaaggaca tcaccaccct tgagcgtggc       300
     gtcagcaaag tcgtcatgca gtacatgcgt gacggtcgcc cggaacagct cgattgcgcg       360
     ctgaacatga tgaccacgtg ggcaaaagcc gatgcgctgg aatcccgcga gttcaaccac       420
     accggcaagt ccatgcgcaa atgggcactg ggcagcatgt cctctgctta cctgcgcttg       480
     aagttctccg attcgcaccc gttggccaat cgccagcagg acgcgcagat catcgaggcc       540
     tggttcagca agctggccga tcaggtggtc agcgactgga gcaatctgcc gctggaaaaa       600
     atcaataacc actcgtactg ggctgcgtgg tcggtgatgt ccaccgctgt cgtgaccaac       660
     cgcaaggacc tgttcgattg ggcggtgaag gaattcaagg tcgccgccaa tcaggtggac       720
     aaggacggct acctgcctaa cgagatgaag cgccgtcaac gtgcgctgtc gtatcacaac       780
     tacgccctgc cgccgctcgc gatgatcgca agcttcgctc aggccaacgg tgttgatctg       840
     cgtccggaaa acaatggtgc gttgaagcgt ctgggtgacc gtgtgctggc cggcgtcaaa       900
     gaccctgcat cgtttgcgga acacaacggt gaaaaacagg acatgacgga cctcaagaaa       960
     gatccgaaat ttgcctggct cgaaccgtac tgctcgctct acacctgcag cccggacgtg      1020
     ctggaagata aacacgaaaa gcagccgttc aaaaccttcc gcctgggcgg tgacctgacc      1080
     aaggtctacg acccgaccca tgaaaaaggc gacaagggcg acaacgacgg ctcctga         1137
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