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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAO53987; SV 1; linear; genomic DNA; STD; PRO; 1707 BP.
XX
PA   AE016853.1
XX
DE   Pseudomonas syringae pv. tomato str. DC3000 choline dehydrogenase
XX
OS   Pseudomonas syringae pv. tomato str. DC3000
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1707
FT                   /organism="Pseudomonas syringae pv. tomato str. DC3000"
FT                   /strain="DC3000"
FT                   /mol_type="genomic DNA"
FT   CDS             AE016853.1:487268..488974
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="betA"
FT                   /locus_tag="PSPTO_0443"
FT                   /old_locus_tag="PSPTO0443"
FT                   /product="choline dehydrogenase"
FT                   /db_xref="GOA:Q88AE7"
FT                   /db_xref="InterPro:IPR000172"
FT                   /db_xref="InterPro:IPR007867"
FT                   /db_xref="InterPro:IPR011533"
FT                   /db_xref="InterPro:IPR012132"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q88AE7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAO53987.1"
FT                   /translation="MTTQSEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRL
FT                   DFRTQMPAALAFPLQGRRYNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGN
FT                   AMDYDGWAKEPGLEDWSYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFH
FT                   AMVEAGVQAGFPRTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDEAKKRDTLSIVT
FT                   HALTDRILFEGKRAVGVAYLVGDSDTRIEVRARKEVLLCGGAIASPQILQRSGVGPAEV
FT                   LNKLDIPVVHDLPGVGQNLQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTG
FT                   IGASNQFEAGGFIRSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHVGSMRSPSRG
FT                   RVHVKSKDPREYPSILFNYMASDQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDV
FT                   QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGMQNLRVVDASIMPIITT
FT                   GNLNAPTIMIAEKIADKIRGRQPLPRSTADYFVAGDKPARGKPLREISHQA"
XX
SQ   Sequence 1707 BP; 348 A; 535 C; 508 G; 316 T; 0 other; 4111488471 CRC32;
     atgaccacgc aatccgaata cgactacatc atcattggtg ccggctctgc cggtaacacc        60
     ctggcagccc gtctcaccga agacgcaggc gtcactgttc tactgctcga agccggtggc       120
     ccggactatc gtctggactt ccgtacccag atgcccgccg ccctggcgtt cccgttgcag       180
     ggccgtcgct acaactgggc ctacgagacc gagccagagc cgcacatgga caaccgccgt       240
     atggaatgcg gtcgcggcaa gggcctgggc ggttcgtcgc tgatcaacgg catgtgctac       300
     atccgcggca acgcgatgga ctacgacggt tgggcgaaag agccgggcct cgaagactgg       360
     agctacctcg actgcctgcc gtactttcgc aaggctgaaa cccgtgacat cggcccgaac       420
     gattaccacg gtggcgaagg cccggtcagc gtgaccacgc ccaaggccgg taacaatccg       480
     ttgttccacg cgatggtcga ggcgggcgtg caggccggtt tcccgcgcac cgacgacctc       540
     aacggttatc agcaggaagg cttcggtccg atggaccgca ccgtgacccc gaaaggccgt       600
     cgcgccagca ctgctcgcgg ttacttggac gaagcgaaaa agcgtgacac gctgagcatc       660
     gtcacacacg cgctgaccga ccgcattctg ttcgaaggca agcgcgctgt gggtgtggcc       720
     tatcttgtgg gtgacagcga cacgcgcatt gaagtccgtg cccgcaagga agttttactg       780
     tgtggcggcg ccatcgcttc gccgcagatt ctgcagcgct ccggtgttgg cccggccgag       840
     gtcctgaaca agctggatat tccagtggtt catgatcttc cgggtgtggg tcagaacctt       900
     caggatcacc tggagatgta cctgcaatac gcctgcaccc agcctgtgtc gctttaccct       960
     tcgttgaagt ggtggaacca gcctgccatt ggcgcagagt ggatgttcct cggcaccggt      1020
     atcggcgcga gcaatcagtt tgaagccggt ggtttcattc gttccagcga agcctttgag      1080
     tggccaaaca ttcagtatca cttcctgccg gtcgcgatta actacaacgg caccaagggt      1140
     gttcaggaac acggcttcca ggcgcacgtt ggctcgatgc gttcgccaag ccgtggtcgc      1200
     gtacacgtca agtccaagga cccgcgtgaa tacccaagca ttctgttcaa ttacatggca      1260
     tcggatcagg actggcagga atttcgcgac ggcatccgcc tgacccgcga gatcatgcag      1320
     caaccggctc tcgatccgta ccgcggccgc gaaatcagcc cgggcatcga cgtgcagtct      1380
     gacgaagcgc tggaccagtt cgtgcgtgaa catgccgaaa cggcgtatca cccatcttgc      1440
     tcctgcaaga tgggcaccga cgaaatggct gtggtcgatg gtcagggccg tgtgcacggc      1500
     atgcagaacc tgcgtgtggt ggatgcctcg atcatgccga tcatcaccac cggcaacctg      1560
     aatgcgccga cgatcatgat cgccgagaaa atcgccgaca agatccgtgg ccgtcagccc      1620
     ctgccacgca gcaccgccga ctacttcgtc gcaggcgaca agccagcacg cggcaagccg      1680
     ctgcgtgaga tcagccacca ggcctga                                          1707
//
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