 |
|
EBI DbfetchID AAO13474; SV 1; linear; genomic DNA; STD; PLN; 2718 BP. XX PA AC125472.2 XX DE Oryza sativa Japonica Group Putative lipoxygenase XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. OX NCBI_TaxID=39947; XX FH Key Location/Qualifiers FH FT source 1..2718 FT /organism="Oryza sativa Japonica Group" FT /chromosome="3" FT /mol_type="genomic DNA" FT /clone="OSJNBa0050H14" FT CDS join(AC125472.2:69672..70044,AC125472.2:70890..71176, FT AC125472.2:71867..72104,AC125472.2:73001..73324, FT AC125472.2:73442..73527,AC125472.2:73652..73759, FT AC125472.2:73843..74147,AC125472.2:74261..74488, FT AC125472.2:74637..75405) FT /codon_start=1 FT /gene="OSJNBa0050H14.14" FT /product="Putative lipoxygenase" FT /db_xref="GOA:Q8H016" FT /db_xref="HSSP:2SBL" FT /db_xref="InterPro:IPR001246" FT /db_xref="UniProtKB/Swiss-Prot:Q8H016" FT /func_characterised="similar sequence" FT /protein_id="AAO13474.1" FT /translation="MELTGLTRAAAAATVTPPAPRRGWGELRFAPLLPGERHGRRKVVV FT AAISEEVPRLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDA FT LWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADF FT GEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPY FT LPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGG FT EKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHT FT LIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKIPLVQKIQESSEGMLR FT YDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITE FT THIAGHLNGLTVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRTIFFLTEAGT FT LKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLR FT THATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTPGP FT VSGEISAAYYRNHWRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLY FT YPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHA FT ALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFM FT AVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHG FT RKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI" XX SQ Sequence 2718 BP; 572 A; 809 C; 874 G; 463 T; 0 other; 1744098132 CRC32; atggagttga ccggcctgac gcgggcggcg gcggcggcca ccgtgacgcc gccggcgccg 60 cgccggggat ggggcgagct ccggttcgcg ccgctgctgc ccggcgagcg gcatgggagg 120 aggaaggtgg tggtggcggc catcagcgag gaggtgccgc ggctggcggc gtcgccgtcg 180 tcggggatca agggcggcgg ggccggggag aggcggccgg cgccggagaa ggtggcgctg 240 cgggcggcgc tgacggtgcg gcggaagcag aaggaggaca tcaaggaggc ggtggccgga 300 cacctcgacg cgctctggga catggtcggc cggaatgtcg tgctcgagct catcagcacc 360 aagatccacc caaggaccaa gaagccgatg cagagtggcc gtgtgtccat caaggactgg 420 tgccagaaga ggggagccaa gggcgaccac gtcgtgtaca cggccgagtt cacggtggac 480 gccgacttcg gcgagccggg cgccatcgcc gtggccaacc ggcacaacag ggagttcttc 540 ctggagagca tcgtcgtcga gggcggcggc ctgccgtgcg ggcctgtgca cttcgcctgc 600 aactcctggg tgcagtccac cagagagctg ccaacaaaga gggtgttctt cagcaacaag 660 ccatatttac cttctgaaac acctcccggg cttagagaac taagggagaa ggaacttaaa 720 gacctaagag gagatggcac aggtgttcgg aaattatctg acagaatata tgattatgcc 780 acatacaatg atttgggaaa tccagataag gggaaggaat tcatcaggcc gatccttgga 840 ggagagaaga taccttaccc acggcgttgc cggactggtc gcccgccaac ggataccaac 900 atgctagcag agagcagagt agagaagccg catccaatat atgttccccg cgatgaggca 960 tttgaggagc tgaagcaggg tgccttctca tcagggaggc tccgggcagt acttcacaca 1020 ttgatcccat cgctgattgc atccatctca gctgagaccc acaatttcca aggcttccac 1080 cacatcgaca acctctataa ggagggcctc aggctgaagc tgggcctgca agaacaccta 1140 ttccagaaga taccacttgt tcagaagatt caagagtcga gcgaagggat gcttcgttac 1200 gacactccta gcattctttc taaggacaag tttgcatggc tccgtgacga tgagtttgct 1260 aggcaggctg ttgcaggaat aaacccagtt aacattgagc ggctgcaggt tttcccacca 1320 gtgagcaagc tggatcctgc aatctatgga ccaccagaat catcaattac tgaaacacac 1380 atagctggac atctcaacgg actcacagta caacaggcaa tggacgaagc aaagctgttc 1440 atagtggact accatgacgc atacctgcca ttcttggacc ggatcaatgc gatagatgga 1500 cggaaagcat atgcgacccg aacaatcttc ttcctgacag aagctggcac actgaaaccg 1560 atcgctatcg agcttagtct tcctccagcc aagccagggg agcctcggcc aagcaaggtc 1620 ctgacgcctc cctatgatgc tacctcgaat tggctctgga tgcttgccaa ggcccatgtc 1680 agctccaacg atgctggtgt ccatcagctg gtcaatcact ggcttaggac gcatgcaaca 1740 atggagccgt tcatcctggc ggcgcaccgg catatgagcg caatgcaccc catcttcaag 1800 ctcctgcacc cgcacatgcg gtacacgctc gagatcaacg cgcttgcacg gcagagcctc 1860 atcaacgccg acggagtgat cgagtcctgc ttcacccccg gccctgtctc cggcgagatc 1920 agcgctgctt actaccgtaa ccactggcgg ggagttgctg tggaggacgc gacgcagccc 1980 catggcgtca ggcttctcat cgaggactac ccatacgcga atgatgggct cctgctctgg 2040 tcggcaattc gaagctgggt ggagtcctac gtgcagctct actacccgga cgccgggacg 2100 gtgcagtgcg atcttgagct gcaggggtgg taccacgagt cgatccatgt cgggcacggc 2160 gacctccggc acgcgccgtg gtggccgccg ctctccacgc cggtggacct ggcgtccatc 2220 ctgacgacgc tggtctggct cgcgtcggcg cagcacgcgg cgctcaactt cgggcagtac 2280 ccgctgggcg ggtacgtccc gaaccggccg ccgctgatac ggcggctgct gccggacctg 2340 gagcgcgacg cggcggagta cgccgcgttc ctcgccgacc cgcaccgctt cttcctgaac 2400 gcgatgcccg gggtgctgga ggcgaccaag ttcatggcgg tggtggacac gctgtcgacg 2460 cactcgcccg acgaggagta cctcggcgag gggcgggacg agggcggcgt gccgtggacg 2520 gcggacgagg cggccgtggc ggcgcacggc atgttcgcgg ccgatgtgcg acgcgccgag 2580 gagaccatcg agaggcggaa cgccgaccac ggccggaaga accggtgcgg cgccggggtg 2640 ctgccgtacg aactgctggc gcccagctcg ccgccggggg tcacctgccg cggcgtgccc 2700 aacagcatct ccatctga 2718 // |
|