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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM69111; SV 1; linear; genomic DNA; STD; INV; 1632 BP.
XX
PA   U28735.2
XX
DE   Caenorhabditis elegans Glycosylation related protein 12, isoform b,
DE   partially confirmed by transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1632
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="X"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F48E3"
FT   CDS             join(U28735.2:4022..4144,U28735.2:4197..4259,
FT                   U28735.2:4329..4423,U28735.2:4475..4592,
FT                   U28735.2:4642..4759,U28735.2:4823..4901,
FT                   U28735.2:5477..5740,U28735.2:5906..6029,
FT                   U28735.2:6078..6136,U28735.2:6177..6246,
FT                   U28735.2:6290..6474,U28735.2:6520..6612,
FT                   U28735.2:7525..7765)
FT                   /codon_start=1
FT                   /gene="gly-12"
FT                   /locus_tag="F48E3.1"
FT                   /standard_name="F48E3.1b"
FT                   /product="Glycosylation related protein 12, isoform b,
FT                   partially confirmed by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF03071 (GNT-I
FT                   family); coded for by the following C. elegans cDNAs:
FT                   CK581806, OSTF020B3_1, OSTR020B3_1, yk243h6.5, yk1050a06.5,
FT                   yk1351f02.5, yk1479h12.5, yk1694e09.5, yk243h6.3,
FT                   yk1050a06.3, EC020519"
FT                   /db_xref="GOA:Q8MQ38"
FT                   /db_xref="HSSP:1FO9"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:Q8MQ38"
FT                   /db_xref="WormBase:WBGene00001637"
FT                   /protein_id="AAM69111.1"
FT                   /translation="MKRVLRRSASKHASTLFKIICILVLCSFIIYLKSEDHDLQKNTAI
FT                   HAPRSNSREDEDDILIPADNKDQQFVAAVLVFCATRPDALRNHLSQILAQRPSHFQYHI
FT                   IVSQDGNKTAVTQVAQKFVKDYKNVSHIQHEKTEIKKRNNYPAISAHYKWALDKAFKGF
FT                   RYDHVIVTEDDLDIGNDFFSYFRWGKQVLNSDDTIWCVSAWNDNGGGPLIDSTRGDLIW
FT                   RTDFFPGLGWMLTKKLWNELSPGFPVAYWDDWMRKPEVRKSRSCIRPEISRTSHNMKLA
FT                   GKGSSGGMFKDYLSKISASSANIDFSLLPVTLVQKSIYDKRLIEQIENARPIDLQNTTG
FT                   MEKTYNYKIVYKNIRDWHRLAAHFKLMTDIRGGMQRTAYYGVVTLMFQNCRVFLVPEST
FT                   YRNPSQLTSYVYDSEWDKQNRFIEFEAYYCKTKKYAGKCDPHSPEMIAFFKKKGWKKRL
FT                   DDWGEMYNCPVTIRVIVSVLSKEHLSDLFRLVLHRIYYRVDHNYAHSFLAYLLSFSRPP
FT                   RHVSNFLFYFCCPGLPFDIKFCMLIN"
XX
SQ   Sequence 1632 BP; 495 A; 346 C; 344 G; 447 T; 0 other; 904466854 CRC32;
     atgaaacggg tgctccgtcg ctcggcatca aaacacgcga gcacactgtt taaaattatc        60
     tgtattcttg tattatgctc ttttattatt tacctgaagt ctgaagacca tgatttgcaa       120
     aaaaatactg ctattcacgc tccacggtcc aattcgcggg aagatgagga tgatatttta       180
     ataccggctg ataataaaga tcaacaattt gttgcagctg tacttgtttt ttgcgcaacc       240
     aggcccgatg ctcttcggaa tcatttatca caaattttag cccaacgccc ttcacacttt       300
     caataccaca tcattgttag tcaagatggc aataagaccg ccgtcacaca agtcgcacaa       360
     aagtttgtca aagactacaa aaacgtgtca catatacaac atgagaagac ggaaatcaaa       420
     aagcggaaca actacccagc catctcggca cattacaaat gggccttgga caaagccttc       480
     aaaggcttcc gttatgatca tgtcattgtg actgaagacg accttgacat aggtaacgat       540
     ttcttttcct acttccgatg gggaaaacaa gttctcaact ctgatgacac tatttggtgt       600
     gtatctgcgt ggaatgacaa tggaggagga ccacttatag attcgacgcg aggcgattta       660
     atttggagga cggacttctt tccgggatta ggatggatgc tcacaaaaaa actctggaac       720
     gaactttcgc ccggatttcc tgttgcgtat tgggatgact ggatgcgaaa gccggaagtg       780
     cggaagagca ggtcatgtat ccgtccggaa atcagtagaa cgtcgcataa catgaagtta       840
     gctggaaaag ggtctagtgg aggtatgttc aaagactatc tcagcaaaat tagcgcatcc       900
     agcgcaaaca ttgacttctc tcttctccct gtcaccctcg tccaaaaatc aatctacgac       960
     aagcgcctta tagaacaaat tgagaatgca cgacccatag acctgcagaa cactactggg      1020
     atggagaaaa cctacaatta caaaattgtg tacaagaaca ttcgagactg gcataggctg      1080
     gccgcccatt tcaaattgat gacagacatt cgaggaggaa tgcagcgaac agcatactat      1140
     ggagttgtca ctttgatgtt ccagaattgc agagtgtttt tggtacctga atcaacgtac      1200
     cgaaatccat cacaacttac tagttacgtc tacgattcag aatgggacaa acaaaaccga      1260
     tttattgaat ttgaagcata ttactgcaaa actaaaaaat atgctggaaa atgcgaccca      1320
     cacagtcccg agatgattgc ctttttcaaa aagaaaggat ggaagaaacg attggatgat      1380
     tggggcgaga tgtacaactg tcctgtgacg atacgggtga ttgtaagcgt tctttcgaaa      1440
     gaacatttgt cggacctgtt caggttagtt ttacatagaa tttattacag ggtggaccat      1500
     aattatgcgc actcgtttct agcctattta ctgtcttttt cgcgaccgcc acgtcatgtc      1560
     tcaaattttt tattttattt ttgttgccct ggtcttccgt ttgacataaa attttgtatg      1620
     cttatcaact ag                                                          1632
//
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