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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM63340; SV 1; linear; mRNA; STD; PLN; 1659 BP.
XX
PA   AY086135.1
XX
DE   Arabidopsis thaliana (thale cress) histone deacetylase, putative
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1659
FT                   /organism="Arabidopsis thaliana"
FT                   /mol_type="mRNA"
FT                   /clone="21721"
FT   CDS             AY086135.1:172..1830
FT                   /codon_start=1
FT                   /product="histone deacetylase, putative"
FT                   /db_xref="GOA:Q8GXJ1"
FT                   /db_xref="InterPro:IPR001876"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8GXJ1"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAM63340.1"
FT                   /translation="MVVETIERSCEGSKRRHVNGGDIAVPCSGEECSNGDINVAPGVSA
FT                   KRARVSREMTFEDIYGADALLNDDDDEDDDCDWEPVQAPMEFVKWCCVNCTMSNPGDMV
FT                   HCCICGEHKESGILRHGYLASPFFKDTGLIEVEEKYGGSSSATSSTAVGFDERMLLHSE
FT                   FEVKAQPHTERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDT
FT                   TSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVR
FT                   HAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEG
FT                   GNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVII
FT                   SAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIK
FT                   VLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKK
FT                   NQMKRKVVRVPTWWKWGRKKLLYNFLSARMISRSK"
XX
SQ   Sequence 1659 BP; 436 A; 322 C; 438 G; 463 T; 0 other; 3978654055 CRC32;
     atggttgtag aaactatcga gaggtcttgt gagggttcaa agagaagaca tgtgaacggt        60
     ggagatatcg ctgttccttg ttcgggagaa gagtgtagca atggagatat aaatgtagct       120
     cctggagttt cagcgaaaag agctagggtt tctagagaaa tgacgtttga agatatttac       180
     ggtgctgatg cattactcaa tgatgatgat gatgaggatg atgattgtga ttgggaacct       240
     gtgcaggcgc ctatggagtt tgtaaaatgg tgttgtgtca attgcactat gtcgaaccct       300
     ggtgatatgg tccactgttg tatatgcggt gagcacaagg aatctggcat tttgaggcat       360
     ggatatttag cgtctccctt ttttaaagac actggtctca ttgaagtcga ggagaaatat       420
     ggaggaagct catctgcaac cagctcgaca gctgttgggt tcgacgagag aatgttgcta       480
     cactcagaat ttgaagtgaa ggcacaacca catacagaga gacctgatcg tcttcgagct       540
     atagctgcta gtcttgccac agctggtgtt tttcctggaa gatgcttgcc tatcaatgca       600
     agggaaatca cgaaacaaga actccagatg gtccacactt cagagcatgt tgatgctgtt       660
     gatactacaa gccagcttct ctatagctac ttcacctctg acacatatgc taatgagtat       720
     tcagcacgtg ctgctagact tgcagcaggt ttgtgcgctg atctagctac agatattttc       780
     actggccgtg taaaaaatgg ttttgctttg gttagacctc ccggtcatca tgctggcgtc       840
     aggcatgcta tggggttttg ccttcacaat aatgcagccg ttgctgcatt agtagcacaa       900
     gcagcagggg caaagaaggt gctgattgtg gactgggatg tccatcatgg caacggaacc       960
     caagagatat tcgaacaaaa caaatctgta ttgtacatat ccttgcacag acatgaggga      1020
     ggaaacttct atcccggtac tggagctgct gatgaggttg gttctaatgg tggggaaggt      1080
     tattgtgtaa atgttccatg gagttgcggt ggagttgggg ataaagacta tatctttgcg      1140
     tttcaacatg tggttctccc catagcttct gcattttctc cagattttgt catcatatct      1200
     gcgggatttg atgcggctag aggagaccca ctaggatgct gtgatgtgac tccggctggc      1260
     tattctcgaa tgacacagat gttgggtgat ctgtgtggtg ggaaaatgct agttattctc      1320
     gagggcggct acaatcttcg ctccatatct gcttctgcaa cagcagtgat caaggtgctt      1380
     ctgggtgaaa atccggagaa cgagttgccc atcgccacca cgccttcagt agccggcctg      1440
     caaactgttc ttgatgtact gaatatccaa ctggagttct ggccatcact tgctatcagc      1500
     tactccaaat tactctcaga gttggaagca cgtctgatcg aaaacaaaaa aaatcagatg      1560
     aaaaggaagg ttgttcgggt tccgacatgg tggaaatggg gacgaaagaa gcttttgtac      1620
     aactttctct cagctcgtat gatttcaaga tcaaagtga                             1659
//
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