 |
|
EBI DbfetchID AAM61886; SV 1; linear; genomic RNA; STD; VRL; 1743 BP. XX PA AF515838.1 XX DE Avian paramyxovirus 2 hemagglutinin XX OS Avian paramyxovirus 2 OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae; OC Paramyxovirinae; Avulavirus. OX NCBI_TaxID=35302; XX FH Key Location/Qualifiers FH FT source 1..1743 FT /organism="Avian paramyxovirus 2" FT /strain="PMV-2" FT /isolate="F6" FT /mol_type="genomic RNA" FT /isolation_source="imported mannikin" FT CDS AF515838.1:1..1743 FT /codon_start=1 FT /product="hemagglutinin" FT /note="HN" FT /db_xref="GOA:Q8JQ94" FT /db_xref="HSSP:1USR" FT /db_xref="InterPro:IPR016285" FT /db_xref="UniProtKB/TrEMBL:Q8JQ94" FT /protein_id="AAM61886.1" FT /translation="MDFPSRENLAAGDISGRKTWRLLFRILTLSIGVVCLAINIATIAK FT LDHLDNMASNTWTTTEADRVISSITTPLKVPVNQINDMFRIVALDLPLQMTSLQKEITS FT QVGFLAESINNVLSKNGSAGLVLVNDPEYAGGIAVSLYQGDASAGLNFQPISLIEHPSF FT VPGPTTAKGCIRIPTFHMGPSHWCYSHNIIASGCQDASHSSMYISLGVLKASQTGSPIF FT LTTASQLVDDNINRKSCSIVASKYGCDILCSIVIETENEDYRSDPATSMIIGRLFFNGS FT YTESKINTGSIFSLFSANYPAVGSGIVVGDEAAFPIYGGVKQNTWLFNQLKDFGYFTHN FT DVYKCNRTDIQQTILDAYRPPKISGRLWVQGILLCPVSLRPDPGCRLKVFNTSNVMMGA FT EARLIQVGSTVYLYQRSSSWWVVGLTYKLDVSEITSQTGNTLNHVDPIAHTKFPRPSFR FT RDACARPNICPAVCVSGVYQDIWPISTATNNSNIVWVGQYLEAFYSRKDPRIGIATQYE FT WKVTNQLFNSNTEGGYSTTTCFRNTKRDKAYCVVISEYADGVFGSYRIVPQLIEIRTTT FT GKSE" XX SQ Sequence 1743 BP; 485 A; 401 C; 418 G; 439 T; 0 other; 543625242 CRC32; atggatttcc catctaggga gaacctggca gcaggtgaca tatcggggcg gaagacttgg 60 agattactgt tccggatcct cacattgagc ataggtgtgg tctgtcttgc catcaatatt 120 gccacaattg caaaattgga tcacctggat aacatggctt cgaacacatg gacaacaact 180 gaggctgacc gtgtgatatc tagcatcacg actccgctca aagtccctgt caaccagatt 240 aatgacatgt ttcggattgt agcgcttgac ctacctctgc agatgacatc attacagaaa 300 gaaataacat cccaagtcgg gttcttggct gaaagtatca acaatgtttt atccaagaat 360 ggatctgcag gcctggttct tgttaatgac cctgaatatg caggggggat cgctgtcagc 420 ttgtaccaag gagatgcatc tgcaggccta aatttccagc ccatttcttt aatagaacat 480 ccaagttttg tccctggtcc tactactgct aagggctgta taaggatccc gaccttccat 540 atgggccctt cacattggtg ttactcacat aacatcattg catcaggttg ccaggatgcg 600 agccactcca gtatgtatat ctctctgggg gtgctgaaag catcgcagac cgggtcgcct 660 atcttcttga caacggccag ccagctcgtg gatgacaaca tcaaccggaa gtcatgcagc 720 atcgtagcct caaaatacgg ttgtgatatc ctatgcagta ttgtgattga aacagagaat 780 gaggattata ggtctgatcc ggctactagc atgattatag gtaggctgtt cttcaacggg 840 tcatacacag agagcaagat taacacaggg tccatcttca gtctattctc tgctaactac 900 cctgcggtgg ggtcgggtat tgtagtcggg gatgaagccg cattcccaat atatggtggg 960 gtcaagcaga acacatggtt gttcaaccag ctcaaggatt ttggttactt cacccataat 1020 gatgtgtaca agtgcaatcg gactgatata cagcaaacta tcctggatgc atacaggcca 1080 cctaaaatct caggaaggtt atgggtacaa ggcatcctat tgtgcccagt ttcactgaga 1140 cctgatcctg gctgtcgctt aaaggtgttc aataccagca atgtgatgat gggggcagaa 1200 gcgaggttga tccaagtagg ctcaaccgtg tatctatacc aacgctcatc ctcatggtgg 1260 gtggtaggac tgacttacaa attagatgtg tcagaaataa cttcacagac aggtaacaca 1320 ctcaaccatg tagaccccat tgcccataca aagttcccaa gaccatcttt caggcgagat 1380 gcgtgtgcga ggccaaacat atgccctgct gtctgtgtct ccggagttta tcaggacatt 1440 tggccgatca gtacagccac caataacagc aacattgtgt gggttggaca gtacttagaa 1500 gcattctatt ccaggaaaga cccaagaata gggatagcaa cccagtatga gtggaaagtc 1560 accaaccagc tgttcaattc gaatactgag ggagggtact caaccacaac atgcttccgg 1620 aacaccaaac gggacaaggc atattgtgta gtgatatcag agtacgctga tggggtgttc 1680 ggatcataca ggatcgttcc tcagcttata gagattagaa caaccaccgg taaatctgag 1740 tga 1743 // |
|