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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM61400; SV 1; linear; mRNA; STD; PLN; 1449 BP.
XX
PA   AY084835.1
XX
DE   Arabidopsis thaliana (thale cress) pectate lyase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1449
FT                   /organism="Arabidopsis thaliana"
FT                   /mol_type="mRNA"
FT                   /clone="119092"
FT   CDS             AY084835.1:26..1474
FT                   /codon_start=1
FT                   /product="pectate lyase-like protein"
FT                   /db_xref="GOA:Q9SCP2"
FT                   /db_xref="HSSP:1JRG"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SCP2"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAM61400.1"
FT                   /translation="MLQRSCIVLFFSLFLFVPQKGFSILNTTLLLVPHPDPELVAYQVQ
FT                   WKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYAL
FT                   GGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKT
FT                   LDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDG
FT                   ISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDS
FT                   GMQVTIAFNHFGEKLIQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTA
FT                   PTNPFAKEVTKRVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKS
FT                   ASFITQITFHSGVLGVGGRNNNLGMWTTTGSEGTSGLDSYNDYTDEMSGAGSTNRLSFS
FT                   VLVFLLSSISYLVVFTSSTQMFML"
XX
SQ   Sequence 1449 BP; 402 A; 316 C; 341 G; 390 T; 0 other; 764324034 CRC32;
     atgcttcaaa gaagctgcat tgtacttttc ttctctcttt ttctgttcgt tccacaaaag        60
     ggtttctcca tactcaacac aactctactt ctcgtaccac atcctgaccc ggaactagtc       120
     gcttatcaag ttcagtggaa agtaaatgca tctataacaa gacgtcaagc tctagacacg       180
     acggaccagg ccggttcaac cccgtgtatc accggtaacc caatcgatga ctgttggaaa       240
     tgcgacccaa actggcccaa taaccgacaa ggtctagcag attgtggtat tgggttcgga       300
     cagtacgcat tgggaggcaa aggtggtcag ttttacttcg tcactgattc ttccgacgat       360
     gatgccgtca accctaaacc gggcactctc agatatgggg tgatacaaga agagccattg       420
     tggatagtgt tcccaagcaa catgatgatt aaactaaagc aagagctaat attcaatagt       480
     tacaagacac ttgatgggag aggagctaat gttcacattg ttggtggtgg ctgcatcact       540
     cttcaatatg tctccaatat catcattcac aacatccata tccaccattg ttaccaatcc       600
     gggaatacta acgtgcggtc aagtccaacg cactatgggt tcagaacgaa atcggacggt       660
     gatggtatct ctatattcgg atcaaaggac atttggatcg accattgttc tctatcgaga       720
     tgcaaggacg gtctgataga tgcggtaatg ggttccacag gaataactat atcgaacaac       780
     ttcttctctc accataatga agtcatgctt cttggtcaca gcgaccacta tgaaccagac       840
     agtggcatgc aggtaacaat tgcgtttaat cactttggag agaaattgat acaaaggatg       900
     ccgaggtgtc gacgtggata catccatgtg gttaataacg attttactca atgggaaatg       960
     tatgccattg gcggtagcgg taacccgact attaacagtc agggtaaccg ctacaccgcc      1020
     ccaaccaacc cgtttgccaa ggaggtgaca aagagagtgg aaacaccgga tggtgattgg      1080
     aaagggtgga attggagatc ggagggggac attttggtga atggagcctt cttcgtggca      1140
     tccggggaag gtgcggaaat gaggtatgag aaggcatata gcgtcgagcc taaatccgcc      1200
     tcattcatca cccaaatcac atttcactct ggtgttcttg gcgttggtgg caggaataac      1260
     aatctgggga tgtggactac tactggatcg gaaggtacta gcggtttaga ttcttataat      1320
     gactataccg atgaaatgtc tggcgctggt tcaaccaacc ggttatcttt ttcagttctt      1380
     gttttcttgc taagttcgat atcatatttg gtcgtgttca cttcttcaac ccaaatgttt      1440
     atgttgtaa                                                              1449
//
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