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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM60924; SV 1; linear; mRNA; STD; PLN; 1428 BP.
XX
PA   AY084341.1
XX
DE   Arabidopsis thaliana (thale cress) putative pectate lyase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1428
FT                   /organism="Arabidopsis thaliana"
FT                   /mol_type="mRNA"
FT                   /clone="104915"
FT   CDS             AY084341.1:180..1607
FT                   /codon_start=1
FT                   /product="putative pectate lyase"
FT                   /db_xref="GOA:Q9SRH4"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SRH4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAM60924.1"
FT                   /translation="METARLFKLVCVICIASLIPTIRANVAEETDEYWVNKANEARKHT
FT                   LMAYHPDPYEIVDHFHERHYDNSTDVEGTEEEKAIASEEEDVIEMISSPTNSTRRSLTG
FT                   RGKGKGKGKWSKLTGPCTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRI
FT                   YVVTSPRDDDMVNPRPGTLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGAN
FT                   VHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGAT
FT                   NIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVA
FT                   YNHFGKGLVQRMPRVRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHY
FT                   REVTKRDYASESEWKNWNWRSEKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVS
FT                   KLTKYAGALDCRVGKAC"
XX
SQ   Sequence 1428 BP; 416 A; 327 C; 360 G; 325 T; 0 other; 402886201 CRC32;
     atggagacgg ctaggctttt caaattagtg tgtgtgatat gtattgccag tttgattccg        60
     accatacgag ccaatgttgc tgaggagacc gatgagtatt gggtaaacaa ggccaatgaa       120
     gctcgtaaac atacccttat ggcttatcat cccgaccctt atgagatcgt cgaccacttc       180
     cacgagcgtc attacgacaa ctcgactgac gtcgagggga ccgaggaaga gaaggcgatc       240
     gcttccgagg aagaggacgt cattgagatg atttctagtc cgacaaacag cacaaggcgg       300
     agcctaaccg gtaggggcaa gggaaaagga aaaggaaaat ggagcaagct aacgggacct       360
     tgcaccgcaa gcaaccccat cgataaatgc tggcgttgcc agcctgattg ggccagacgt       420
     cgcaagaagc tcgttcactg tgtccgtggg tttggttaca ggaccaccgg aggcaaacgc       480
     ggccgcatct atgtagtcac gagccccaga gacgatgata tggtgaaccc tagacctgga       540
     acactacgtc acgctgtgat ccagaaagaa cctctatgga tcgtttttaa gcacgatatg       600
     agcattcggt taagccaaga gctgatgatt actagtgaca agacaatcga tgctcgtggc       660
     gctaacgtgc acatcgcata tggtgctggt atcacgatgc agtacgtgca caatatcatc       720
     atccatgggc ttcacgtcca ccacatcgtg aaaagcagtg gtggtttgat aagagattcg       780
     attaaccact ttgggcatag aggagaggct gatggagatg gtatctctat ctttggggca       840
     acaaacattt ggcttgacca catttctatg tctaaatgcc aagatggact tatcgacgct       900
     ataatgggtt ccaccgcaat caccatctct aactctcatt tcacccacca caacgatgtg       960
     atgttgcttg gtgcacaaaa caacaacatg gatgacaaga agatgcaagt cacagtggct      1020
     tacaaccatt tcggaaaagg acttgtgcag aggatgccta gggtccgatg gggtttcgtc      1080
     cacgttgtca acaatgacta cactcattgg gagctttacg cgatcggtgg tagccaaggt      1140
     cctaccattc tcagccatgg aaaccgtttc atcgctcctc ctcacaaaca acactacaga      1200
     gaggtgacaa agagggatta tgcttcagaa agcgaatgga aaaactggaa ctggagatcc      1260
     gagaaagatg ttttcatgaa caatgcatat ttcagacaat ctggaaatcc tcatttcaag      1320
     tgttcgcatt ctaggcaaca gatgataaag cccaaaaatg gtatggccgt ttctaagctt      1380
     accaaatacg ccggagcatt ggattgccgg gtcggaaaag catgctaa                   1428
//
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