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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM54988; SV 2; linear; genomic DNA; STD; PRO; 915 BP.
XX
PA   U80928.5
XX
DE   Rhizobium etli CFN 42 pectate lyase secreted protein
XX
OS   Rhizobium etli CFN 42
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
OC   Rhizobium/Agrobacterium group; Rhizobium.
OG   symbiotic plasmid p42d
OX   NCBI_TaxID=347834;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..915
FT                   /organism="Rhizobium etli CFN 42"
FT                   /plasmid="symbiotic plasmid p42d"
FT                   /host="Phaseolus"
FT                   /strain="CFN 42"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(U80928.5:70657..71571)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="RHE_PD00062"
FT                   /product="pectate lyase secreted protein"
FT                   /note="similar to hrpW [Erwinia amylovora]; similar to
FT                   entrez-protein:CAA74158.1 Putative location:bacterial
FT                   cytoplasm Psort-Score: 0.4414; GO_component: GO:0005576 -
FT                   extracellular; GO_function: GO:0030570 - pectate lyase
FT                   activity"
FT                   /db_xref="GOA:Q8KKZ2"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q8KKZ2"
FT                   /protein_id="AAM54988.2"
FT                   /translation="MCGVDGQRPIDFDRTSRFDLESDCLGGSNRADTDFTTIRTRKVSP
FT                   FEDFSGNPPTLTSYVPNSRETSENGMDSDPKDLLRKHINWQSDSKKVDPSDEKQATTLQ
FT                   TTTEKPDLSKEGSVIVVNEPIVVDGGVFDGKGATYTASSKLGDGGQSETQSPLFILKNG
FT                   ATLKNVDLGENGADGIHVYDGATLENVNWQNVGEDALTVKSAGDITIIGGSAKGATDKI
FT                   FQINADTRFYLKDFVADGFTTLVRTNGGKQIDADVTIDGGAFSHGSNVFRTDSSLASVT
FT                   FLSDITLDDVKNWTRVGDNQSGV"
XX
SQ   Sequence 915 BP; 217 A; 282 C; 257 G; 159 T; 0 other; 735734630 CRC32;
     atgtgtggcg tagatggaca aaggcccata gacttcgaca gaacctcccg tttcgacctt        60
     gagtccgatt gccttggcgg cagcaatagg gccgacacgg atttcaccac catccgaacc       120
     cgcaaggtct cgcccttcga agatttctcc ggcaacccgc cgacactgac ctcctatgtg       180
     ccgaattcgc gggaaacgtc ggaaaacggc atggattccg accccaagga tctgctgcgc       240
     aagcacatca actggcaatc cgactccaag aaggtggatc catccgacga gaaacaggcc       300
     acgactttgc agaccacgac ggaaaaaccc gacctctcga aagagggcag cgtcatcgtc       360
     gtcaacgagc cgatcgtcgt ggatggcggc gtgttcgacg gcaagggcgc gacctatacg       420
     gcctcgtcca agctcggcga tggcggccag tccgaaaccc aatcgccgct gttcattctc       480
     aagaacggcg cgacgctcaa gaatgtcgat ctcggcgaga atggcgccga cggaatccac       540
     gtctatgacg gcgcgacgct cgaaaacgtc aattggcaga atgtcggcga ggatgcgctg       600
     acggtaaaaa gcgccggcga catcactatt atcggtggct ccgccaaggg cgcgaccgac       660
     aagatcttcc agatcaatgc cgacacgagg ttctatctga aggatttcgt cgctgacggc       720
     tttaccacgc tcgtgcgcac caacggcggc aagcagatcg acgccgacgt caccatcgat       780
     ggcggggcgt tctcccacgg cagcaacgtc ttccgcaccg acagctcact tgccagcgtg       840
     acgttcctct ccgatatcac gctggacgat gtgaagaact ggacgcgtgt aggtgacaac       900
     caatcgggcg tctga                                                        915
//
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