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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM39756; SV 1; linear; genomic DNA; STD; PRO; 1368 BP.
XX
PA   AE008922.1
XX
DE   Xanthomonas campestris pv. campestris str. ATCC 33913 homogentisate
DE   1,2-dioxygenase
XX
OS   Xanthomonas campestris pv. campestris str. ATCC 33913
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas.
OX   NCBI_TaxID=190485;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Xanthomonas campestris pv. campestris str. ATCC
FT                   33913"
FT                   /strain="ATCC 33913"
FT                   /mol_type="genomic DNA"
FT                   /culture_collection="ATCC:33913"
FT   CDS             AE008922.1:536190..537557
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="hmgA"
FT                   /locus_tag="XCC0438"
FT                   /product="homogentisate 1,2-dioxygenase"
FT                   /note="identified by sequence similarity; putative; ORF
FT                   located using Blastx/Glimmer/Genemark"
FT                   /db_xref="GOA:Q8PDA2"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8PDA2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAM39756.1"
FT                   /translation="MIQLDPTLLLSWRAGQHPDAPMHNDQRYMTGFGNEFASEAVADTL
FT                   PVGQNSPQRVAHGLYAEQLSGTAFTAPRGENRRSWLYRMRPAAVHGTFSLIEQSQFHND
FT                   FGHGPVPPDQLRWSPLPLPQTPTDFIDGLYTMAGNGSPEAMNGVAVHLYAANASMQDRF
FT                   FYNADGELLLVPQLGRLRVHTELGMLELEPQQIGVIPRGVRFRVELRDGTARGYVCENF
FT                   GGLLHLPDLGPIGSNGLANPRDFETPCAAFEQREGRFELVAKFQGHLWRADIGHSPLDV
FT                   VAWHGNYAPYRYDLRRFNTIGSISFDHPDPSIFTVLTSPSDTHGTANMDFAIFPPRWLV
FT                   AQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLHNCMSGHGPDAATFDKASQ
FT                   ADLSRPDVITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAFQAPPAS"
XX
SQ   Sequence 1368 BP; 233 A; 459 C; 433 G; 243 T; 0 other; 596980395 CRC32;
     ttgatccaac tcgatcccac ccttctgctg tcgtggaggg cgggtcaaca tccggacgca        60
     cccatgcaca acgaccagcg ttacatgacc ggcttcggca atgaattcgc cagcgaggca       120
     gtagccgata ccttgccggt tggccagaac tcgccgcagc gtgtggcgca cgggctgtat       180
     gccgagcagt tgtcgggtac tgcattcacc gcgccgcgcg gcgaaaatcg gcgcagttgg       240
     ctgtaccgca tgcgtcctgc tgcggtgcac gggacgttct cgctgatcga gcagtcgcag       300
     ttccacaacg atttcggcca cggaccggtg ccgccggacc agttgcgctg gagcccgctg       360
     ccgttgccgc agacacccac cgatttcatc gatggcctgt acaccatggc cgggaatggt       420
     agccccgaag caatgaatgg cgtggccgtg catctgtatg cggccaatgc ctccatgcag       480
     gatcgcttct tctataacgc cgacggcgag ctgctgctgg tgccgcaact cgggcgcctg       540
     cgcgtgcaca ccgagctcgg catgctcgag ctggagccgc agcagatcgg ggtgattccg       600
     cgcggcgtgc gcttccgggt cgagctacgc gacggcaccg cacgtggcta tgtctgcgag       660
     aacttcggtg gtttgctgca cctgcccgac ctggggccga ttggcagtaa tggcctggcg       720
     aatccgcgcg acttcgaaac cccgtgtgcg gccttcgagc aacgcgaagg ccgctttgaa       780
     ctggtggcca aattccaggg ccacctgtgg cgtgcggaca tcggccattc gccactggac       840
     gtggtggcct ggcacggcaa ctacgcgccg taccgctacg acctgcgccg cttcaacacc       900
     atcggctcga ttagcttcga tcatccagac ccgagtattt ttacggtgct gacctcgccc       960
     agcgacacgc acggcacggc caacatggat ttcgcgatct tcccgccgcg ctggctggtg      1020
     gcgcagcaca ccttccgccc accgtggttc caccgcaatg tggccagcga gttcatgggg      1080
     ctggtgcacg gcgtgtacga cgccaaggcc gacggcttcg cgccgggcgg tgcgtcgctg      1140
     cacaactgca tgagcggcca cggcccggac gcggccacct tcgacaaggc ctcgcaagcg      1200
     gacctgtcgc ggccggacgt catcaccgag acgatggcct tcatgttcga aacccgcgcc      1260
     gtgctgcgcc ccaccgcgca agcgctgcac gcaccgcatc ggcagggcga ttatcagcag      1320
     tgctgggcgg ggttgcgcaa agcatttcag gcgccgccgg ctagctga                   1368
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