EBI Dbfetch

ID   AAM26920; SV 1; linear; genomic DNA; STD; PLN; 1245 BP.
XX
PA   AY102168.1
XX
DE   Solanum lycopersicum mannan endo-1,4-beta-mannanase precursor
XX
OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
OX   NCBI_TaxID=4081;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1245
FT                   /organism="Solanum lycopersicum"
FT                   /cultivar="Moneymaker"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AY102168.1:796..1149,AY102168.1:1412..1606,
FT                   AY102168.1:1691..1813,AY102168.1:2046..2248,
FT                   AY102168.1:2981..3350)
FT                   /codon_start=1
FT                   /gene="MAN2'"
FT                   /product="mannan endo-1,4-beta-mannanase precursor"
FT                   /function="random hydrolysis of 1,4-beta-D-mannosidic
FT                   linkages in mannans, galactomannans, glucomannans, and
FT                   galactoglucomannans"
FT                   /EC_number="3.2.1.78"
FT                   /note="similar to Lycopersicon esculentum product encoded
FT                   by GenBank Accession Number AF184238"
FT                   /db_xref="GOA:Q6YM50"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6YM50"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAM26920.1"
FT                   /translation="MAYFQRLISCIFVLFLLSLAFACEARVLLDENNANDQGFVRVNGA
FT                   HFELNGSPFLFNGFNSYWLMHVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRA
FT                   LQISPGVYDERVFQGLDFVISEAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQIN
FT                   GDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNT
FT                   LNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEID
FT                   FATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQ
FT                   NIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIIT
FT                   SQSHAMTALAHLVKI"
XX
SQ   Sequence 1245 BP; 398 A; 188 C; 272 G; 387 T; 0 other; 3985675841 CRC32;
     atggcttatt ttcaaagact aattagttgt atttttgtgc ttttcctttt gtccttagct        60
     tttgcatgtg aagctagggt tttacttgat gaaaataatg caaatgatca agggtttgtt       120
     agagtcaatg gtgcacattt tgaactcaat ggatcacctt ttctattcaa tggtttcaac       180
     tcttactggc taatgcatgt tgctgctgag cctagtgaga ggtacaaggt ctccgaggtc       240
     cttcgcgaag catcttctgc agggctttct gtatgccgta cttgggcttt tagtgatgga       300
     ggtgataggg cattacaaat ttcacctggt gtttatgatg aacgtgtttt tcagggtttg       360
     gattttgtta tatcggaggc taagaagtat ggaattcgat taatcttgag ctttgtaaac       420
     aactacaacg attttggagg gaaagctcaa tatgttcaat gggcgcgaaa tgcaggagct       480
     cagataaatg gagacgatga tttctacact aattatatta ccaaaaatta ttacaagaat       540
     cacattaaga aagttgttac aaggttcaat accattactg gaatgacata taaagatgat       600
     tcaactatca tggcatggga actcatgaat gagcctagga accaagctga ttattcagga       660
     aatactctta acgcatgggt tcaagaaatg gcaagttttg tgaaatcact tgataacaaa       720
     catttgctgg aaataggaat ggaaggattt tatggtgatt cagtgccaga aaggaagtca       780
     attaatcctg gctatcaagt tggaacagat tttattagta accatttgat caaagagatt       840
     gattttgcca ctattcatgc atacactgac caatggttat ctggtcaaag tgatgatgct       900
     caaatgatct tcatgcaaaa atggatgaca agtcattggc aagacgcaaa aaacatactt       960
     aaaaaaccac tggttctagc tgaatttggc aaatcaagta gagatccagg atataatcaa      1020
     aatatacgcg atacatttat gagcacgata tatagaaata tttatagttt agcaaaagat      1080
     ggaggaacga tgggaggaag tttaatatgg cagctcgttg cacaaggcat ggaaaattat      1140
     gaagatggtt attgtattga attgggaaaa aatccatcca ctgctggaat tattacaagt      1200
     cagtctcatg ccatgacagc tttggctcat ttggttaaga tttag                      1245
//