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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAM22973; SV 1; linear; mRNA; STD; PLN; 2532 BP.
XX
PA   AF499737.1
XX
DE   Oryza sativa Japonica Group beta-galactosidase
XX
OS   Oryza sativa Japonica Group
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Ehrhartoideae; Oryzeae; Oryza.
OX   NCBI_TaxID=39947;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2532
FT                   /organism="Oryza sativa Japonica Group"
FT                   /cultivar="Nipponbare"
FT                   /mol_type="mRNA"
FT                   /dev_stage="immature seed"
FT   CDS             AF499737.1:30..2561
FT                   /codon_start=1
FT                   /product="beta-galactosidase"
FT                   /db_xref="GOA:Q10RB4"
FT                   /db_xref="InterPro:IPR000922"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q10RB4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAM22973.1"
FT                   /translation="MGRGCLAALLGGAVAVAVLVAVVHCAVTYDKKAVLVDGQRRILFS
FT                   GSIHYPRSTPEMWDGLIEKAKDGGLDVIQTYVFWNGHEPTPGNYNFEGRYDLVRFIKTV
FT                   QKAGMFVHLRIGPYICGEWNFGGFPVWLKYVPGISFRTDNEPFKNAMQGFTEKIVGMMK
FT                   SENLFASQGGPIILSQIENEYGPEGKEFGAAGKAYINWAAKMAVGLDTGVPWVMCKEDD
FT                   APDPVINACNGFYCDTFSPNKPYKPTMWTEAWSGWFTEFGGTIRQRPVEDLAFGVARFV
FT                   QKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLAREPKFGHLKELHRAVK
FT                   LCEQPLVSADPTVTTLGSMQEAHVFRSSSGCAAFLANYNSNSYAKVIFNNENYSLPPWS
FT                   ISILPDCKNVVFNTATVGVQTNQMQMWADGASSMMWEKYDEEVDSLAAAPLLTSTGLLE
FT                   QLNVTRDTSDYLWYITRVEVDPSEKFLQGGTPLSLTVQSAGHALHVFINGQLQGSAYGT
FT                   REDRKISYSGNANLRAGTNKVALLSVACGLPNVGVHYETWNTGVVGPVVIHGLDEGSRD
FT                   LTWQTWSYQFQVGLKGEQMNLNSLEGSGSVEWMQGSLVAQNQQPLAWYRAYFDTPSGDE
FT                   PLALDMGSMGKGQIWINGQSIGRYWTAYAEGDCKGCHYTGSYRAPKCQAGCGQPTQRWY
FT                   HVPRSWLQPTRNLLVVFEELGGDSSKIALAKRTVSGVCADVSEYHPNIKNWQIESYGEP
FT                   EFHTAKVHLKCAPGQTISAIKFASFGTPLGTCGTFQQGECHSINSNSVLEKKCIGLQRC
FT                   VVAISPSNFGGDPCPEVMKRVAVEAVCSTAA"
XX
SQ   Sequence 2532 BP; 640 A; 540 C; 701 G; 651 T; 0 other; 1244512296 CRC32;
     atggggaggg ggtgcctggc tgcgctgctc ggcggcgcgg tggcggtggc cgtgctggtc        60
     gccgtcgtcc actgcgcggt gacgtacgac aagaaggcgg tgctcgtcga cggccagagg       120
     aggattctct tctccggatc catacattac ccgaggagca cacccgaaat gtgggacggg       180
     ctaattgaga aggctaaaga tggaggcttg gatgtgatcc agacctatgt cttttggaat       240
     gggcatgaac caactcctgg aaattacaat tttgaaggga ggtacgatct ggtcaggttc       300
     atcaagactg tccagaaggc tggcatgttt gttcatctcc gcatcggtcc ctacatttgt       360
     ggagagtgga attttggggg atttccagtt tggttgaagt atgtaccagg catcagcttc       420
     aggacggaca atgaaccttt caagaatgca atgcaggggt tcacagagaa aattgtgggc       480
     atgatgaaga gtgaaaacct ctttgcttca caaggcggtc ctattatcct ctctcagatt       540
     gagaacgagt atgggccaga aggtaaagag tttggggctg ccggcaaggc atatatcaac       600
     tgggcggcaa agatggccgt gggattggac accggtgtgc cgtgggtgat gtgcaaggag       660
     gatgacgcac ctgacccagt gatcaatgca tgcaatggtt tctattgtga cacattttct       720
     cctaacaagc cttacaagcc tacgatgtgg actgaagctt ggagtggatg gtttactgaa       780
     ttcggaggaa ccatccgtca acgaccagtt gaagatctcg catttggtgt tgctcgcttc       840
     gtacagaagg gtggttcttt tatcaactac tacatgtatc atggaggaac gaattttggt       900
     cgcacggctg gaggtccctt tatcaccacg agctatgatt atgatgctcc acttgatgaa       960
     tatggtcttg caagggaacc aaagtttggg caccttaaag aactccatag agctgttaag      1020
     ttatgtgagc agcctttggt ttctgccgat ccaactgtga ctacccttgg aagtatgcaa      1080
     gaggcccatg tgttccgatc ttcctctggc tgtgcagctt tccttgcaaa ctacaattct      1140
     aactcgtatg ccaaagttat cttcaacaat gaaaattaca gccttccacc ttggtcaatc      1200
     agcatccttc ctgattgcaa aaatgttgtt tttaacactg caacagttgg tgttcagaca      1260
     aatcaaatgc aaatgtgggc agacggggct tcttcaatga tgtgggagaa gtatgatgag      1320
     gaggttgatt cattggcagc tgctccattg ctcacgtcaa ctggtctact tgagcagctt      1380
     aatgtcacaa gagacaccag tgattacctc tggtacatta cgagggtgga ggtagaccca      1440
     tctgagaagt ttctacaagg tggcacgcct ctgtcactca ctgtgcagtc tgctggccat      1500
     gcgctgcatg tcttcatcaa tgggcaactc caaggttctg cctatggaac cagggaagat      1560
     cggaaaatct catatagtgg caatgctaac cttcgtgctg gtacaaacaa agttgcactg      1620
     ttgagtgttg cttgtggact gccgaatgtc ggagtgcatt atgagacgtg gaacactggt      1680
     gttgttggtc ctgttgtgat tcacgggttg gacgaaggtt caagagatct gacttggcag      1740
     acttggtcct atcagttcca ggttggcctg aaaggtgaac agatgaatct aaactcctta      1800
     gaaggctcag gctcagttga atggatgcaa ggatcattgg tagcacaaaa ccaacaaccg      1860
     ttggcatggt atagggcata ctttgatact cccagtggtg acgagccact ggctctggat      1920
     atgggcagca tgggtaaggg tcaaatatgg ataaatgggc aaagcattgg acggtactgg      1980
     acagcatatg cggaaggtga ctgcaaaggt tgccattaca ctgggtcata cagggcaccc      2040
     aagtgtcagg caggttgtgg tcagcctaca cagcgctggt atcatgtgcc aagatcctgg      2100
     ttgcaaccaa ctagaaatct gctagtggtt tttgaggaac ttggcggtga ttcttcaaag      2160
     attgcccttg cgaagcggac agtctcaggt gtctgtgctg atgtatctga atatcatcca      2220
     aatatcaaga actggcagat cgagagctat ggggaaccag agttccacac ggcaaaggtg      2280
     catttaaaat gtgcacctgg gcagaccatt tctgcaatca aatttgctag ctttgggaca      2340
     cctcttggaa cttgcggaac attccagcaa ggggagtgcc attcaattaa ctcaaactct      2400
     gttcttgaaa agaaatgcat tggactacaa agatgtgtcg tcgcaatctc tcccagcaac      2460
     tttggtggag atccctgccc ggaggtgatg aaaagggtgg cggttgaggc ggtatgctct      2520
     accgctgcat ag                                                          2532
//
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