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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAL19724; SV 1; linear; genomic DNA; STD; PRO; 1284 BP.
XX
PA   AE006468.1
XX
DE   Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 putative
DE   pectinesterase
XX
OS   Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella;
OC   Salmonella enterica subsp. enterica serovar Typhimurium.
OX   NCBI_TaxID=99287;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1284
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Typhimurium str. LT2"
FT                   /strain="LT2; SGSC 1412; ATCC 700720"
FT                   /mol_type="genomic DNA"
FT                   /serovar="Typhimurium"
FT                   /culture_collection="ATCC:700720"
FT   CDS             complement(AE006468.1:850320..851603)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ybhC"
FT                   /locus_tag="STM0786"
FT                   /product="putative pectinesterase"
FT                   /note="similar to E. coli putative pectinesterase
FT                   (AAC73859.1); Blastp hit to AAC73859.1 (427 aa), 86%
FT                   identity in aa 1 - 427"
FT                   /db_xref="GOA:Q8ZQR3"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q8ZQR3"
FT                   /protein_id="AAL19724.1"
FT                   /translation="MNTLSVSRLALALAFGVTLSACSSTPPDQIPSDQTAPGTASRPIL
FT                   SANEAKNFVAARYFASLTPNTAPWSPSPITLPAQPDFVVGPAGTPGVTHTSIQAAVDAA
FT                   MVKRTNKRQYIAIMPGDYQGTVYVPAAPGSLTLYGTGEKPIDVKIGMAIDGEMSVADWR
FT                   RAVNPGGKYMPGKPAWYMFDNCQSKHAATIGVMCSAAFWSQNNGLQLQNLTIENTLGDS
FT                   VDAGNHPAVALRTDGDKVQINKVNILGRQNTFFVTNSGVQNRLQTDRQPRTLVTNSYIE
FT                   GDVDMVSGRGAVVFDNTNFQVVNSRTQQEAYVFAPATLSNIYYGFLAINSRFNASGDGV
FT                   AQLGRSLDVDANTNGQVVIRDSVINEGFNVAKPWADAVISKRPFAGNTGTVDDKDEVQR
FT                   NLNDTNYNRMWEYNNRGIGSKVVAEPKQ"
XX
SQ   Sequence 1284 BP; 292 A; 370 C; 365 G; 257 T; 0 other; 1594329923 CRC32;
     gtgaatacat tatcggtttc ccgtctggcg ctggcactgg cttttggcgt gacgctgagc        60
     gcctgtagct ctacgccacc cgatcagatc ccttccgatc aaaccgcgcc tggcaccgcc       120
     tcgcgcccaa ttctgtcggc aaatgaagcg aaaaacttcg ttgcggcgcg ctattttgcc       180
     tccctgacgc cgaataccgc cccgtggtcg ccgtcgccga ttaccctgcc cgcacagcct       240
     gactttgtgg tggggccggc aggtacgcca ggcgttacgc acacctcgat tcaggccgcg       300
     gtcgatgcgg caatggttaa acgcacgaac aaacgccagt acattgctat tatgccgggc       360
     gactatcagg ggaccgtgta tgttcccgcc gcgccgggaa gtctgaccct gtacgggacc       420
     ggtgaaaaac cgatcgatgt gaaaattggg atggcgattg atggtgaaat gagtgtcgct       480
     gactggcgcc gcgcggtgaa tcccggcggg aaatatatgc ctggtaaacc cgcctggtat       540
     atgttcgata actgccaaag caaacacgcc gcgacgatcg gtgtaatgtg ttctgccgcg       600
     ttctggtcgc agaataacgg tctgcagcta caaaatctga ccatcgagaa cacgctgggc       660
     gacagcgtcg atgccggaaa ccatccggcg gtggcgctgc gtaccgatgg cgacaaagtc       720
     cagattaaca aggtcaatat ccttggccgc cagaacacct tctttgtgac caacagcggc       780
     gtgcagaacc gtctgcaaac cgatcgccag ccacgtacgc tggtgacgaa cagctatatt       840
     gaaggcgatg tggatatggt ttccggacgc ggcgccgtgg tgttcgataa caccaacttc       900
     caggtcgtca actcccgcac acagcaggaa gcctacgtct tcgccccggc gacgctgtcc       960
     aatatttact atggcttttt ggcgatcaac agccgcttta acgcctccgg cgatggcgtt      1020
     gcgcagcttg gccgctcgct ggatgtcgac gccaacacca acggtcaggt cgtgatccgc      1080
     gacagcgtga ttaacgaggg cttcaacgtt gccaaaccgt gggccgacgc ggtcatctcg      1140
     aaacgtccgt ttgctggaaa tacgggaacc gtggatgaca aagacgaggt gcagcgtaat      1200
     ctgaacgaca ctaactacaa ccgcatgtgg gaatacaaca accgcggtat aggcagtaaa      1260
     gtagtggcgg aacctaagca gtaa                                             1284
//
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