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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAK56557; SV 1; linear; mRNA; STD; PLN; 1188 BP.
XX
PA   AY034075.1
XX
DE   Solanum lycopersicum mannan endo-1,4-beta-mannosidase
XX
OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
OX   NCBI_TaxID=4081;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1188
FT                   /organism="Solanum lycopersicum"
FT                   /cultivar="Castalia"
FT                   /mol_type="mRNA"
FT                   /tissue_type="pericarp of red fruit"
FT   CDS             AY034075.1:31..1218
FT                   /codon_start=1
FT                   /gene="Man4"
FT                   /product="mannan endo-1,4-beta-mannosidase"
FT                   /EC_number="3.2.1.78"
FT                   /note="mannanase"
FT                   /db_xref="GOA:Q8L5J1"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="PDB:1RH9"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8L5J1"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAK56557.1"
FT                   /translation="MNNSIILIFVAILIIFPNEFSKPTRAFSNNNFVYTDGTHFALNGK
FT                   SLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGV
FT                   YNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFT
FT                   NPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLE
FT                   MAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFATIHMYPN
FT                   QWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKI
FT                   YGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLAL"
XX
SQ   Sequence 1188 BP; 405 A; 183 C; 222 G; 378 T; 0 other; 205273540 CRC32;
     atgaataact caatcatctt aatttttgtt gctattttaa taatatttcc aaatgaattt        60
     agcaagccta ctagagcttt ttcaaataat aattttgttt atacagatgg aactcatttt       120
     gcattaaatg gaaagtcact ttatataaat ggttttaatg catattggtt aatgtatata       180
     gcttatgatc catcaacaag aattaaagtt acaaatacat tccaacaagc ttctaaatat       240
     aaaatgaatg ttgctagaac ttgggctttt tctcatggtg gttctagacc tttacaatct       300
     gcacctggtg tttacaacga acaaatgttt cagggattgg attttgtgat atcagaagct       360
     aaaaaatatg gaattcactt aattatgtca ttagtcaata attgggatgc ttttggagga       420
     aagaaacaat atgtagaatg ggcagtgcaa agagggcaga aattaacaag tgatgatgat       480
     ttcttcacta atcctatggt caaaggattc tacaaaaata atgtcaaggt tgtgcttaca       540
     agagtgaata caataaccaa agtagcatat aaagatgatc caacaattct ttcatgggaa       600
     ttaataaatg agcctagatg cccatctgac ctctctggga aaacatttca gaactgggtt       660
     ttagaaatgg cgggatattt gaaatcaata gattcaaatc atctcttgga gattggactt       720
     gaaggatttt atgggaatga catgagacaa tacaatccta attcttacat ttttgggact       780
     aattttatct ccaacaatca agttcaagga attgattttg ccacaattca tatgtaccct       840
     aatcaatggt tgccaggttt aactcaagag gcccaagaca aatgggcttc acaatggatc       900
     caagtccata tagatgactc caaaatgttg aaaaagccct tattaattgc agaatttggc       960
     aagtctacaa aaaccccagg gtatactgtt gcaaagaggg ataattattt tgaaaaaata      1020
     tatggaacca tttttaattg tgccaaaagt ggaggcccat gtggtggtgg gcttttttgg      1080
     caagtattgg gccaaggaat gtcaagtttt gatgatggtt atcaagtggt cttgcaagag      1140
     agcccatcaa cttctagagt tatactctta caatctctgg ctctctaa                   1188
//
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