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EBI DbfetchID AAK37738; SV 1; linear; genomic RNA; STD; VRL; 1842 BP. XX PA AY029299.1 XX DE Avian paramyxovirus 6 hemagglutinin-neuraminidase XX OS Avian paramyxovirus 6 OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae; OC Paramyxovirinae; Avulavirus. OX NCBI_TaxID=157619; XX FH Key Location/Qualifiers FH FT source 1..1842 FT /organism="Avian paramyxovirus 6" FT /host="duck" FT /strain="APMV-6/duck/Taiwan/Y1/98" FT /mol_type="genomic RNA" FT CDS AY029299.1:7122..8963 FT /codon_start=1 FT /gene="HN" FT /product="hemagglutinin-neuraminidase" FT /db_xref="GOA:Q91HJ3" FT /db_xref="HSSP:1E8U" FT /db_xref="InterPro:IPR002345" FT /db_xref="UniProtKB/TrEMBL:Q91HJ3" FT /protein_id="AAK37738.1" FT /translation="MASSSDMRQSQATLYEGDPNSKRTWRTVYRVITILLDITVLCVGI FT VAVVRMSTITTKDIDNSISSSITSLSADYQPIWSDTHQKVNSIFKEVGITIPVTLDKMQ FT VEMGTAVNIITDAVRQLQGVNGSAGFSITNSPEYSGGIDTLIYPLNSLNGKALAVSDLL FT EHPSFIPAPTTSHGCTRIPTFHLGYRHWCYSHNTIEPGCHDAGESIMYVSMGAVGVGHR FT GKPVFTTSAATILDDGRNRKSCNIIANPNGCDVLCSLVKQTENEDYADPTPTPMIHGRL FT HFNGTYTESELNPGLFNNHWVAQYPAVGSGVVSHGKLFFPLYGGISPKSKLFNELKSFA FT YSTHHAELKCENLTERQKKDLYNAYRPGKIAGSLWAQGVVTCNLTNLADCKVAIANTST FT MMMAAEGRLQLVQDRIVFYQRSSSWWPVLIYYDIPISDLISADHLEIVNWTPYPQSKFP FT RPTWTKGVCEKPAICPAVCVTGVYQDVWVVSIGSQSNETVVVGGYLDAAAARQDPWIAA FT ANQYNWLVRRRLFTSQTEAAYSSTTCFRNTKQDRVFCLTIMEVTDNLLGDWRIAPLLYE FT VTVADKQQGNRNYAPMGRMGTDKFQYYTPGDKYTPQH" XX SQ Sequence 1842 BP; 543 A; 419 C; 438 G; 442 T; 0 other; 731166237 CRC32; atggcttcct caagcgatat gagacagagt caggcaactc tatatgaggg tgaccctaat 60 agcaaaagga catggaggac cgtgtaccgg gttatcacca tattgttgga tataaccgtc 120 ctttgtgtcg gcatagtggc agtagtcagg atgtcaacca ttacaacaaa agatattgat 180 aacagtatct catcgtccat tacttccctg agtgccgatt accagccaat atggtcagat 240 acccatcaga aagtcaacag tattttcaag gaagtcggaa tcactatccc cgtcacactc 300 gacaagatgc aagtggaaat gggaacagca gttaacataa tcactgatgc tgtaaggcaa 360 ctacaaggag tcaatgggtc agcaggattt agcattacca attcaccaga atatagtgga 420 gggatagaca cactgatata ccctcttaac tcacttaatg ggaaggcttt agctgtatca 480 gacctattag aacatccgag cttcatacca gcgcctacca cctctcatgg ttgcacccgc 540 attcctacat tccacctagg ataccgtcat tggtgttata gtcacaacac aatagaacct 600 ggttgtcacg atgcaggaga aagcattatg tacgtatcta tgggtgcggt aggggtcggc 660 catcgtggga aacccgtgtt tacgacaagt gcagcaacaa tcctagatga tggaaggaac 720 aggaaaagtt gtaacatcat agcaaaccct aatgggtgtg atgtcttgtg cagcttggtt 780 aagcaaacag agaatgagga ctacgctgac cctacaccga ccccaatgat ccacggtagg 840 ctccacttca atggcacgta caccgagtct gaactcaacc ctggcctatt taataatcat 900 tgggtcgctc aatatccagc agttggcagc ggtgttgtca gccatgggaa actattcttc 960 ccgctttacg gagggatatc accgaagtca aaactgttca acgagcttaa gtcatttgct 1020 tacagcaccc atcacgccga gttgaaatgt gagaacctga cagagagaca aaaaaaagat 1080 ctatataacg catataggcc tgggaaaata gcaggatctc tctgggctca aggggttgta 1140 acatgtaatc tgaccaatct agctgattgt aaagttgcaa ttgcgaacac gagcaccatg 1200 atgatggccg ccgaggggag gttacagctt gtgcaagata ggattgtctt ctaccagaga 1260 tcctcatcat ggtggccagt cctaatatat tatgatatcc ctattagtga ccttatcagt 1320 gccgatcatt tagagatagt aaactggact ccatacccac aatctaaatt tccgaggccc 1380 acctggacaa agggcgtatg cgagaaaccg gcaatatgcc ccgctgtgtg tgtaacgggt 1440 gtttaccagg atgtttgggt agtcagtata gggtcccaga gcaatgagac tgttgtggtt 1500 ggcggatact tagatgctgc agcagcccgt caggatccat ggattgcagc agccaaccag 1560 tataactggc tggttaggcg tcgccttttt acatcccaga ctgaagcagc atactcatca 1620 accacttgct tcagaaacac gaagcaggat agagtgttct gcctgactat aatggaagtt 1680 acagacaacc tactcggaga ctggaggatc gccccgctgt tatatgaggt tactgtggct 1740 gataagcaac agggcaatcg caattacgcg ccaatgggaa ggatggggac ggataagttc 1800 caatattata caccaggtga taaatatact cctcagcatt ga 1842 // |
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