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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAH83445; SV 1; linear; mRNA; STD; VRT; 1761 BP.
XX
PA   BC083445.1
XX
DE   Danio rerio (zebrafish) otopetrin 1
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1761
FT                   /organism="Danio rerio"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_ZGC_19"
FT                   /clone="MGC:103626 IMAGE:7254979"
FT                   /tissue_type="Larvae, whole, 5 day old, mixed wild type,
FT                   650 pooled"
FT   CDS             BC083445.1:173..1933
FT                   /codon_start=1
FT                   /gene="otop1"
FT                   /product="otopetrin 1"
FT                   /db_xref="GOA:Q7ZWK8"
FT                   /db_xref="InterPro:IPR004878"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7ZWK8"
FT                   /db_xref="ZFIN:ZDB-GENE-030131-1613"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAH83445.1"
FT                   /translation="MVEHGGTDSMWLNKYNPAAASSASSSSSSDAENKLFSRLKVSLTK
FT                   KYPQKNAELLSAQYGTNLLLLGVSVMLALAAQSGPVKEEHLLSFITVLMLVQLVWMLCY
FT                   MIRRERERSPVPERDAHAGASWIRGGLTMLALLSLIMDAFRIGYFVGYHSCISAALGVY
FT                   PIVHALHAISQVHFLWFHIKDVIKKYETFERFGVIHAVFTNLLLWCNGVMSETEHFMHN
FT                   HRRRLIEMGYANLSTVDVQPHCNCTTSVCSMFSTSLYYLYPFNIEYHIFVSAMLFVMWK
FT                   NIGRTLDRHSNRKRRSTGTTGLLLGPLGGLVALASSVSVLVVYLIHLEKTEEMHEAAVS
FT                   MFYYYGVAMMACMCVGSGTGLLVYRMENRPMDTGSNPARTLDTELLLASSLGSWLMSWC
FT                   SVVASVAEAGQKSPSFSWTSLTYSLLLVLEKCIQNLFIVESLYRRHSEEEEDAAAPQVF
FT                   SVAVPPYDGILNHGYEAHDKHREAEPAAGSHALSRKQPDAPLPAGQRLDVTPGRKRQIL
FT                   KNICMFLFMCNISLWILPAFGCRPQYDNPLENETFGTSVWTTVLNVAIPLNLFYRMHSV
FT                   ASLFEVFRKV"
XX
SQ   Sequence 1761 BP; 327 A; 549 C; 544 G; 341 T; 0 other; 388185326 CRC32;
     atggtggagc acggcggcac cgacagcatg tggctgaaca agtacaaccc cgcggcggcc        60
     tccagcgcct cctcgtcgtc ctcctcggac gcggaaaaca aacttttctc caggctgaag       120
     gtgagtctga ccaagaagta cccgcagaag aacgcggagc tgctgagcgc gcagtacggc       180
     accaacctgc tgctgctcgg ggtgtcggtg atgctggcgc tggcggcgca gagcggcccg       240
     gtgaaggagg agcacctgct gagcttcatc acggtgctga tgctggtgca gctcgtctgg       300
     atgctctgct acatgatccg gagggagcgc gagcgcagcc cggtgccgga gagagacgcg       360
     cacgcgggcg ccagctggat ccgaggtggt ctgaccatgc tggctctgct gtccctcatc       420
     atggacgctt tccgcatcgg gtatttcgtg ggctatcact cctgcatctc ggctgcgctc       480
     ggggtctacc ccatcgtgca cgcgctgcac gccatctctc aggtgcattt cctctggttc       540
     cacattaaag atgtcatcaa gaaatatgaa acctttgaaa ggtttggagt gattcacgct       600
     gtcttcacta atctgctgct gtggtgtaac ggtgtgatgt cagagactga acacttcatg       660
     cacaaccaca ggagacggct gatcgagatg ggatacgcaa acctgtccac cgtggatgtg       720
     cagccccact gtaactgcac caccagcgtg tgctccatgt tctccaccag cctctactat       780
     ctgtacccct tcaacatcga gtaccacatc tttgtgtcgg cgatgctgtt cgtgatgtgg       840
     aagaacatcg gccgcacgct ggaccggcac agcaaccgca agcgccgcag caccgggacc       900
     acgggactcc tgctggggcc gctggggggg ctggtggcgc tggccagctc cgtcagtgtg       960
     ctggtggtct acctgatcca cctggagaag acggaggaga tgcacgaggc cgccgtctcc      1020
     atgttctact actacggcgt ggccatgatg gcgtgcatgt gtgtgggcag cgggacgggg      1080
     ctgctggtgt accgcatgga gaaccggccc atggacaccg gctccaaccc ggcgcgcacg      1140
     ctggacacgg agctgctgct ggcctcgtct ctgggctcgt ggctgatgtc ctggtgcagc      1200
     gtggtggcgt cggtggccga ggccgggcag aagtctccga gcttcagctg gaccagcctg      1260
     acctactcgc tgctgctggt gctggagaag tgcatccaga acctgttcat cgtggagtcg      1320
     ctgtaccgcc gccacagcga ggaggaggag gacgccgccg caccgcaggt cttctccgtc      1380
     gctgtgcctc cgtatgacgg catccttaac cacggatacg aggcgcacga taaacaccgc      1440
     gaggccgaac ccgccgccgg cagccacgcc ctcagcagga aacagcccga cgctccactt      1500
     cctgcaggac agcggctgga cgtgacgccc ggacgcaagc ggcagatcct caagaacatc      1560
     tgcatgttcc tcttcatgtg caacatctcg ctgtggatcc tcccggcgtt cggctgccga      1620
     ccgcagtatg ataaccctct ggagaacgag accttcggca ccagcgtctg gaccaccgtg      1680
     ctgaacgtgg ccatcccgct caacctgttc taccgcatgc actcggtggc gtcgctcttc      1740
     gaggtcttcc ggaaggtctg a                                                1761
//
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