spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAH64670; SV 1; linear; mRNA; STD; VRT; 2406 BP.
XX
PA   BC064670.1
XX
DE   Danio rerio (zebrafish) carbohydrate (chondroitin) synthase 1
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2406
FT                   /organism="Danio rerio"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_ZEmb3"
FT                   /clone="MGC:64191 IMAGE:6798417"
FT                   /tissue_type="Embryo, zebrafish whole embryo 72 hpf"
FT   CDS             BC064670.1:286..2691
FT                   /codon_start=1
FT                   /gene="chys1"
FT                   /product="carbohydrate (chondroitin) synthase 1"
FT                   /db_xref="GOA:Q6P296"
FT                   /db_xref="InterPro:IPR008428"
FT                   /db_xref="UniProtKB/TrEMBL:Q6P296"
FT                   /db_xref="ZFIN:ZDB-GENE-030131-3127"
FT                   /protein_id="AAH64670.1"
FT                   /translation="MAGRSRRSWFSVLLGLVVGFTLASRLILPRASELKKAGQKRRASG
FT                   GGAGGCGGGGGMMMMMKKEYGGVLMPGTEKPSVPQSSSFLFVGVMTAQKYLNNRAVAAY
FT                   RTWAKTIPGKVEFFSSEGSDTTIPIPIVALQNVDDSYPPQKKSFMMLKYMHDHYLDQFE
FT                   WFMRADDDVYIKSEKLESFLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPG
FT                   VIMSREVLRRMVPHIRQCLQEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEP
FT                   NKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMS
FT                   RYSNTEVHREDLQLGMPPSFMRFHPHQREEVLEWEFLTGKYIFSSSDGQPPRRGIDSSQ
FT                   KMALDDIIMQVMEMINANAKTRGRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKG
FT                   KTMTVPVRRHAYLQQTFSKIQFLEEEEMDARVLAARINQDSDSLSFLSNSLKMLVPFKL
FT                   SSPGIEQHEPKEKKINILVPLAGRYEIFLRFMANFEKICLIPNQNVKLLILLFSTDNNT
FT                   ERIKQIELMREYRMKYPKADMEIKPVSGPFSRALALEVGSAHFTNDSLLFYCDVDLLFT
FT                   PDFLTRCRGNTILGEQTYFPIIFSQYDPKVVYAGKVPSDNHYVFTSKTGLWRHYGFGIV
FT                   CVYKGDLVKAGGFDVSIQGWGLEDVDLFNKFVQSGIKLFRSTDTGIVHVHHPVVCDPNL
FT                   DPKQYKMCLGSKASSHGSTQQLAELWLEKNNHSFRKISNSNNESMRTE"
XX
SQ   Sequence 2406 BP; 598 A; 646 C; 652 G; 510 T; 0 other; 993635472 CRC32;
     atggcaggaa ggagtcgcag atcttggttt agcgtgttgc tggggctggt ggtcgggttc        60
     acactggcgt ccaggctcat cctgccccgg gccagcgagc tgaagaaagc gggtcagaag       120
     cggcgggcga gcggcggcgg cgcgggaggc tgcggaggcg gcggagggat gatgatgatg       180
     atgaagaagg agtacggagg ggtcttgatg cccggtaccg agaagccctc agtgccccag       240
     tctagcagct ttctgtttgt gggcgtcatg accgcgcaga agtacctgaa taaccgcgcc       300
     gtggcagcat ataggacctg ggccaagacc atcccgggca aggtggagtt tttctccagt       360
     gaaggttctg acaccaccat ccccatcccc attgtggctc tgcagaacgt ggatgactcg       420
     taccctccgc agaagaagtc cttcatgatg ctcaaataca tgcatgacca ctatttggac       480
     cagttcgagt ggttcatgcg agccgacgac gacgtctaca tcaaaagcga aaagctggag       540
     agtttcctaa ggagtctcaa cagcagcgag gccatctttc tgggccagac gggcatggga       600
     gcccgcgacg aactgggcaa actggcgctg gagccggggg agaacttctg catgggcggc       660
     cctggtgtta tcatgagccg cgaggtgctg cgcaggatgg ttccccacat ccgccagtgc       720
     ctgcaggaga tgtacaccac ccatgaggac gtggaggtgg gccgctgcgt gcgcagattc       780
     gccggagtgc agtgtgtttg gtcctacgag atgcagcagc tgttctatga gaattacgag       840
     ccaaacaaga agggctacat ccgtgatctc cacaacagta agatccacag agccataacc       900
     cttcacccca acaagaaccc accttaccag tatcggttgc acagctacat gttgagccgg       960
     aagattgcag agctgcgcca ccgcaccatt cagctccatc gtgagattgt gcaaatgagc      1020
     cgctacagca acaccgaggt gcacagggaa gaccttcaac tgggcatgcc tccatccttc      1080
     atgcgctttc atccccacca acgtgaggag gtgctggaat gggaattcct cacgggaaag      1140
     tacattttct catcctcaga tggacagcct ccccgtcgag gcattgactc ctcgcagaag      1200
     atggcgctgg acgacatcat catgcaagtt atggagatga ttaacgccaa tgccaagaca      1260
     cgcggaagag tcattgactt caaagagatc caatatggct accgaagggt caaccctatg      1320
     tatggtgcag agtacgtact ggatctgctg ctgctctaca agaagcacaa ggggaagact      1380
     atgacagtgc ccgtaaggag gcatgcgtat cttcagcaga ccttcagcaa gatccagttc      1440
     ttggaagaag aagagatgga cgctcgagtc ctggctgcca ggatcaacca agactccgac      1500
     tcgctgtctt tcttgtccaa ctccctcaag atgctcgtcc cgttcaagtt gagcagccca      1560
     ggcatcgaac aacacgaacc caaagagaag aagatcaaca tccttgtgcc gctggccgga      1620
     cgctacgaga tttttctgcg cttcatggcc aacttcgaga agatctgcct cattcccaac      1680
     cagaatgtca agcttctgat tctgcttttc agcacggaca acaacactga gcgcatcaag      1740
     caaatcgagc tcatgaggga gtatcgcatg aagtacccca aagccgatat ggagatcaaa      1800
     ccggtttccg gaccattctc ccgtgctctg gccctggagg tcggctcggc ccactttacc      1860
     aatgattctt tactcttcta ctgtgacgtg gacttactgt ttactcctga cttcttgact      1920
     cgatgtcgtg ggaataccat acttggggaa cagacatact ttcctattat tttcagccag      1980
     tatgacccaa aggttgtcta cgcagggaag gtgcccagcg acaaccacta cgtgttcaca      2040
     tccaaaacag gcctgtggag acactatggt tttggtattg tctgcgtcta caaaggagac      2100
     ctggtcaaag ctggtggttt tgacgtctcc atccaaggtt ggggactgga ggacgttgac      2160
     cttttcaaca agtttgtcca atccgggatc aagctgttcc gcagtacgga taccggcatc      2220
     gttcacgtgc atcaccctgt ggtttgcgac cccaatcttg atcccaagca gtacaaaatg      2280
     tgcctgggat ccaaagcatc ctcgcacggc tccacgcagc aactcgcaga gctatggttg      2340
     gagaaaaaca accacagctt ccgaaagatc tcgaactcca ataatgaatc aatgaggaca      2400
     gaatag                                                                 2406
//
spacer
spacer