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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAH49936; SV 1; linear; mRNA; STD; MUS; 2437 BP.
XX
PA   BC049936.1
XX
DE   Mus musculus (house mouse) partial Mthfd1l protein
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
OX   NCBI_TaxID=10090;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2437
FT                   /organism="Mus musculus"
FT                   /lab_host="DH10B"
FT                   /strain="FVB/N-3"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_Mam2"
FT                   /clone="IMAGE:5374413"
FT                   /tissue_type="Mammary tumor. MMTV-LTR/INT3 model. 5 month
FT                   old mouse. Taken by biopsy."
FT   CDS             BC049936.1:<1..2437
FT                   /codon_start=2
FT                   /gene="Mthfd1l"
FT                   /product="Mthfd1l protein"
FT                   /db_xref="GOA:Q3V3R1"
FT                   /db_xref="InterPro:IPR000672"
FT                   /db_xref="MGI:1924836"
FT                   /db_xref="PDB:2EO2"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3V3R1"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAH49936.1"
FT                   /translation="KVLNALKPEKDVDGVTDINLGKLVRGDAPECFVSPLAKAAVELVE
FT                   KSGITLDGKKVLVVGAHGPLEAALQWLFQRKGSMTMSCPWATPQLPDKLREADIVVLGS
FT                   PKPEEIPAAWIPSGTTILNCFHDFLSGKLSGGSPGVPVDKLIAEESVSLLAAALRIQNM
FT                   VSSGRRWLREQQHRRWRLHCLKLQPLSPVPSDIEISRGQTPKAVDVLAKEIGLLADEIE
FT                   IYGKSKAKVQLSLLERLKDQTDGKYVLVAGITPTPLGEGKSTVTIGLVQALTAHLKVNS
FT                   FACLRQPSQGPTFGVKGGAAGGGYAQVIPMEEFNLHLTGDIHAITAANNLLAAAIDTRI
FT                   LHESTQTDKALYNRLVPLVNGVREFSEIQLSRLKKLGIHKTDPSTLTEEEVRKFARLNI
FT                   DPATITWQRVLDTNDRFLRKITIGQGSTEKGYSRQAQFDIAVASEIMAVLALTDSLTDM
FT                   KERLGRMVVASDKDGQPVTAEDLGVTGALTVLMKDAIKPNLMQTLEGTPVFVHAGPFAN
FT                   IAHGNSSVLADKIALKLVGEEGFVVTEAGFGADIGMEKFFNIKCRASGLVPNVVVLVAT
FT                   VRALKMHGGGPSVTAGVPLKKEYTEENIQLVADGCCNLQKQIQIAQLFGVPVVVALNVF
FT                   KTDTRAEIDLVCELAKRAGAFDAVPCYHWSAGGKGSVDLARAVREAANKRSRFQFLYDV
FT                   QLPIVEKIRVIAQTVYGAKDIELSPEAQSKIDRYTQQGFGNLPICMAKTHLSLSHEPDK
FT                   KGVPRDFTLPISDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTETEQVKGLF"
XX
SQ   Sequence 2437 BP; 623 A; 582 C; 688 G; 544 T; 0 other; 2491783977 CRC32;
     caaagttctc aatgctttga aaccagaaaa agatgtggac ggggtgaccg acatcaatct        60
     ggggaagctc gtacgaggtg acgctccgga gtgttttgtt tcacccttgg ccaaagctgc       120
     tgtagaactt gttgaaaagt cagggatcac tttggatgga aagaaggtct tggtcgtagg       180
     ggcgcacggg cccctggaag ctgccctgca gtggcttttc cagagaaaag gatctatgac       240
     aatgagctgc ccctgggcaa cacctcagct tccagacaag cttcgagagg cagacattgt       300
     ggtcttaggc tcacctaagc cagaagagat tcctgctgcg tggattccat caggaaccac       360
     cattctcaat tgcttccatg acttcttgtc agggaagctg agcggaggtt ctcctggggt       420
     ccccgtggac aaactcattg cagaagagag cgtgagtctc cttgctgcgg ctctgcgcat       480
     tcagaacatg gtgagcagcg gcaggaggtg gctcagagag cagcaacatc gaagatggcg       540
     actgcactgc ttgaaactgc agcctctctc acctgtgccc agtgatattg agatttctcg       600
     aggacagact ccaaaagctg tggatgtcct tgccaaggag ataggattgc ttgcagatga       660
     aattgaaatc tatggcaaga gcaaagccaa agtccaattg tccctgctgg agaggttaaa       720
     ggatcaaaca gatggaaaat acgtcttggt tgctgggatc acgcccaccc cgctcggaga       780
     agggaagagt acagtcacca tcggactagt gcaggcgctg accgctcacc tgaaagtcaa       840
     ctccttcgcc tgtctgaggc agccttctca gggacccact tttggagtga aaggaggagc       900
     tgcaggaggt ggatatgctc aggtcatccc catggaggag ttcaaccttc acctgactgg       960
     ggacatccat gccatcactg ccgctaataa cttgctggcc gcagccatcg acacgagaat      1020
     tttacatgag agcactcaaa cagacaaggc tctctacaat cgactggttc ccttagtgaa      1080
     tggtgtcaga gaattttcag aaattcaact ttctcggctg aagaaactgg ggatacataa      1140
     gactgatcca agcacactga ccgaggagga agtgaggaag ttcgcccgcc tcaacattga      1200
     ccccgcaacc atcacgtggc agagagtatt ggacacgaac gaccgatttc tgagaaaaat      1260
     aaccattgga cagggaagta cagagaaagg atattcccgg caggcacagt ttgacattgc      1320
     agtggccagc gagatcatgg ccgtgctggc cttgactgat agcctcacag acatgaaaga      1380
     gcggctagga agaatggtgg tggccagtga caaagacggg cagcctgtga cagctgagga      1440
     cttgggggtg accggcgctc tgacagtttt gatgaaagac gccatcaagc caaatctgat      1500
     gcagaccctt gaaggaacac ctgtgtttgt gcatgctggt ccctttgcca acatcgctca      1560
     cggcaactca tcagtattag ctgataaaat cgcgctgaaa ttggtcggcg aagaagggtt      1620
     tgtggtgact gaagctggct ttggggctga tattgggatg gagaaattct tcaatatcaa      1680
     atgccgagct tctggcctgg tgcccaacgt tgtcgtgctg gtagccaccg ttcgagctct      1740
     gaagatgcat ggaggcgggc cgagtgtaac tgctggggtt cctctcaaga aagaatatac      1800
     agaggagaac attcagctgg tagctgatgg ctgctgcaac ctacagaagc aaattcagat      1860
     cgctcagctc ttcggggtgc cggtggtggt ggcactgaat gtcttcaaga cggacacccg      1920
     tgcagagatt gacttggtgt gtgagctcgc taaacgggcc ggtgcctttg atgcggtccc      1980
     ctgctatcac tggtcggctg gagggaaagg atctgtggac ttggcccggg ctgtgagaga      2040
     agctgcgaat aaaagaagcc gcttccagtt cctgtatgat gttcagcttc ccatcgtgga      2100
     aaagataaga gtcattgccc agactgtcta tggagccaag gacattgagc tgtctcctga      2160
     ggcgcagtcc aaaatcgatc gctatacgca acagggtttt ggaaatttgc ccatttgcat      2220
     ggcgaagacc cacctctctc tctctcatga acctgacaaa aagggagtgc cgagggattt      2280
     cactctgccc atcagtgatg tccgggccag catcggggct gggttcattt atcctttggt      2340
     gggaacgatg agcacaatgc caggactgcc cacccgaccc tgcttttatg atatagacct      2400
     tgacacagaa acggagcaag ttaaaggctt gttctaa                               2437
//
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