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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAH49316; SV 1; linear; mRNA; STD; VRT; 1995 BP.
XX
PA   BC049316.1
XX
DE   Danio rerio (zebrafish) galactosylceramidase b
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1995
FT                   /organism="Danio rerio"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="Sugano SJD adult male"
FT                   /clone="MGC:56444 IMAGE:5612358"
FT                   /tissue_type="Whole body, adult male"
FT   CDS             BC049316.1:59..2053
FT                   /codon_start=1
FT                   /gene="galcb"
FT                   /product="galactosylceramidase b"
FT                   /db_xref="GOA:Q7ZUD5"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q7ZUD5"
FT                   /db_xref="ZFIN:ZDB-GENE-040426-2115"
FT                   /protein_id="AAH49316.1"
FT                   /translation="MYIGNQCCVVLSIFLYISGCLGENYDIDDSLGLGQTFDGIGGLSG
FT                   GGATSRLLVNYEEPYRSQILDYLFKPKFGASLQILKVEIGGDAQTTDGTEPSHMHYEDD
FT                   ENYFRGYEWWLMVEAKKRNPNITLIGLPWAFPGWVGNGKNWPYDFPDITASYVVAWIHG
FT                   AKKYHDLDIDYIGIWNEKSFNVKYIKLLRYLLDKRGLEKVKIIASDDLWEPITSAVFAD
FT                   KELYDAIEVLGVHYPGTKTVPRALKTGKKLWSSEDYSTFNDNVGGGCWARILNQNYVNG
FT                   KMTATISWNLVASYYENLPFGRDGIMTANEPWSGNYVVESPVWTTAHTTQFTEPGWTYL
FT                   QTVGHFTHGGSYVALTDQRGNLSIITETMTHDHSVCIRPPLRPYNVTVQNVTFNLKGTF
FT                   AFISQLDVWHSKFDFKTDKTVLFQKLDPVKVIGGSFSIELDVDEIYTFTTITNGQRGTY
FT                   PDPPPSAPFPKSYRDDFNVSGNFSEAPNFADQTGVFEYFTNLTDPGPHVFTLRQVVTQR
FT                   PITWAADADQTISVIGDYGWHDIMVSCDVYMEAVQTGGVFIAARVDRGGGVIRSTRGVF
FT                   FWVYADGTYKITNDLRGLAVLAKGSAGTRARTWYTLTLRVQGNYASADLNGYSLWKNAV
FT                   LLNPLHGWVAIGTSSFQLAQFDNFVIEAE"
XX
SQ   Sequence 1995 BP; 552 A; 405 C; 484 G; 554 T; 0 other; 3137310890 CRC32;
     atgtacatag gaaatcagtg ttgtgtggtt ttgagcattt ttctctatat cagtggttgt        60
     ttaggggaga attacgatat agatgatagt ctcggattag gacaaacgtt tgatggcatt       120
     ggtggattaa gcggtggtgg ggcgacatcg cgtttacttg tcaattatga ggagccatat       180
     cggagtcaga tactagacta cctgtttaag ccaaaatttg gagcctcctt acaaatccta       240
     aaggttgaaa tcggaggcga tgctcagact acagatggaa ctgagccctc acacatgcac       300
     tatgaagatg atgagaatta ttttagaggg tatgaatggt ggctaatggt ggaagccaag       360
     aagaggaatc caaacatcac cctcataggt ctaccatggg cctttccagg ttgggttgga       420
     aatggtaaaa actggcctta tgatttccct gatatcactg cctcttatgt ggtggcgtgg       480
     attcatggag ctaagaagta ccatgacctg gatattgact atatcgggat atggaatgaa       540
     aagagcttta atgtgaaata cataaagctt ttgcgatact tactggataa aaggggtctg       600
     gaaaaagtta aaatcattgc cagtgatgac ctctgggagc caatcacctc tgctgtattt       660
     gctgacaaag aattatatga tgctattgaa gtcttggggg tacattaccc aggcacaaaa       720
     actgtgcctc gtgccctgaa gactggcaag aaactgtggt cctctgaaga ctatagtacc       780
     ttcaatgaca atgttggcgg aggttgctgg gcccgaattc tcaaccagaa ctatgtcaat       840
     ggcaaaatga cagcgaccat atcctggaac cttgttgcaa gttattatga gaaccttccc       900
     tttggaagag atggaataat gactgcaaat gagccgtgga gtggaaatta tgttgttgag       960
     tcccctgttt ggacaacagc ccacactacc cagtttactg agcctggctg gacatacctg      1020
     cagacagtag gacacttcac tcatggtggg agttacgttg cactgactga tcagagagga      1080
     aatctctcaa taatcactga aactatgacc catgaccact ctgtgtgtat ccgacctcct      1140
     ctgcgtccct ataatgtcac agtccagaat gtaacattca atctgaaagg aacttttgct      1200
     ttcatcagcc agctggatgt gtggcactca aagtttgatt tcaagacaga taagacggtc      1260
     ctcttccaaa aacttgaccc tgttaaagta ataggtgggt ctttcagcat agagcttgat      1320
     gtcgatgaaa tatatacatt tactactata accaatggtc agagagggac ttaccctgat      1380
     cctccaccct ctgctccatt tcctaaatca tacagagatg attttaatgt ctctggaaat      1440
     ttctcagaag ctccgaactt tgcagatcag acaggggttt ttgaatactt cactaacctt      1500
     acagatcctg gacctcatgt ttttactctg cgtcaggtgg tcactcagcg tcccatcaca      1560
     tgggctgcag atgctgatca gacaataagt gtcattggtg attatgggtg gcatgacata      1620
     atggtgtcgt gtgacgtcta catggaggct gtccagaccg gtggagtatt cattgccgct      1680
     cgagtggaca gaggtggagg tgtcatccga agtacaagag gagtcttttt ctgggtgtat      1740
     gctgatggca cctacaaaat caccaatgat ctccgtggat tggcggtcct tgccaaaggt      1800
     tcggctggaa ctagagcacg tacatggtac acattgaccc ttagagtcca gggaaactat      1860
     gcctcagcag atctcaatgg ctattctctg tggaagaatg cagtgctctt gaaccctctg      1920
     catggatggg tggccatagg cactagttct tttcaacttg cacagtttga taattttgtc      1980
     atagaggcag aataa                                                       1995
//
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