spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAG18689; SV 1; linear; genomic DNA; STD; PRO; 1212 BP.
XX
PA   AE004437.1
XX
DE   Halobacterium sp. NRC-1 LPS biosynthesis
XX
OS   Halobacterium sp. NRC-1
OC   Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
OC   Halobacterium.
OX   NCBI_TaxID=64091;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1212
FT                   /organism="Halobacterium sp. NRC-1"
FT                   /strain="NRC-1; ATCC 700922"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AE004437.1:44245..45456)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="rfbU1"
FT                   /locus_tag="VNG_0051G"
FT                   /old_locus_tag="VNG0051G"
FT                   /product="LPS biosynthesis"
FT                   /note="RfbU1"
FT                   /db_xref="GOA:Q9HSW1"
FT                   /db_xref="InterPro:IPR001296"
FT                   /db_xref="UniProtKB/TrEMBL:Q9HSW1"
FT                   /protein_id="AAG18689.1"
FT                   /translation="MHIAFIHPSFPSAEGTGATHSATQIVSGLSELDHDIDVYCASEPQ
FT                   QNRLSSDINLYHLDGESQHPHTNTKLNREVKARTNEFRKYDIVHSYLPSLIPSVANLGK
FT                   NLDLSTVVTLNAYGGVCAKNDLLYLNEEHCEAKSNAKCLNCIARTGHQNNEQGYLYQTV
FT                   SQLFSLRSINAGEDRLEYIDGFRAPSGHVRDNYTKFGFEEEKIHVIPHPLNDDFLVDHT
FT                   SDFSEPINILYVGSLERHKGVDKLVPIIQGLRQREHDVELTVVGTGGLQSKMEEQSVNR
FT                   NVEDYVDFAGFVSNEQLPSVYASHDVFIHPGIWEEPLARVYIEALATGTPIVTREYGSI
FT                   ETIIGDGGVTTDGSIDGFVQTIAELINANKLPALSEGGRSHVERYDRSQIVSQVEDLYG
FT                   SVLT"
XX
SQ   Sequence 1212 BP; 334 A; 320 C; 293 G; 265 T; 0 other; 2631846611 CRC32;
     atgcatattg ctttcataca tccctcgttt ccatcagcag aggggactgg ggcaactcat        60
     tctgcaacac aaatcgtatc tgggctatcc gaattagacc acgatatcga cgtctattgc       120
     gcttctgagc cgcaacaaaa cagattatca tctgacatca atctatatca tctcgatggc       180
     gaaagccaac acccccacac caacacaaaa ttaaatcgag aggtgaaagc gaggactaac       240
     gaattccgaa aatacgatat cgtacacagt tacttgcctt cgttaattcc ctccgtagca       300
     aatctcggga aaaaccttga cctgagtact gttgttactc tcaacgctta cggtggcgta       360
     tgtgcaaaaa atgatcttct ctatctgaac gaagagcatt gcgaggcaaa gtcgaatgcg       420
     aagtgcctca attgcatcgc tcgaaccggc catcagaaca acgagcaggg atatctgtat       480
     cagaccgtga gccagctatt ttcactgcga tcgattaatg ccggtgaaga ccgactcgaa       540
     tacatcgatg gcttccgggc gccgtctggt cacgttcgag ataactacac caagttcgga       600
     ttcgaggagg agaaaatcca tgtgattcca catccactta atgacgattt tcttgtggac       660
     cacacgagcg acttctcaga accgattaat attctctacg taggctccct cgaacggcac       720
     aagggagtcg acaagctcgt ccccatcatt caaggactcc ggcagcgaga gcacgacgtc       780
     gaactcacag tagtcggtac tggcgggctc caatcgaaga tggaggaaca gagcgtgaac       840
     cgcaacgtcg aagattacgt cgactttgcg ggcttcgtgt ctaacgaaca gttaccgtcg       900
     gtgtacgcga gtcacgacgt attcattcat ccaggaatct gggaggagcc actcgcccgc       960
     gtgtacatcg aagcacttgc aacgggtacg ccaatcgtca cccgagagta cggcagcatc      1020
     gagacgatta ttggcgacgg gggtgtgaca accgacggaa gcatcgacgg cttcgttcag      1080
     acaatcgctg agctcatcaa cgcgaataag ctccctgctc tttcggaagg cgggagaagt      1140
     cacgtggagc gctacgatcg aagccaaatc gtctcacaag tcgaagatct gtacggctca      1200
     gtccttacgt ga                                                          1212
//
spacer
spacer