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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF93419; SV 1; linear; genomic DNA; STD; PRO; 1122 BP.
XX
PA   AE003852.1
XX
DE   Vibrio cholerae O1 biovar El Tor str. N16961 GDP-mannose 4,6-dehydratase
XX
OS   Vibrio cholerae O1 biovar El Tor str. N16961
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=243277;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1122
FT                   /organism="Vibrio cholerae O1 biovar El Tor str. N16961"
FT                   /chromosome="I"
FT                   /strain="N16961"
FT                   /serotype="O1"
FT                   /mol_type="genomic DNA"
FT   CDS             AE003852.1:249323..250444
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="VC_0243"
FT                   /product="GDP-mannose 4,6-dehydratase"
FT                   /note="similar to GB:X59554 PID:48385; identified by
FT                   sequence similarity; putative"
FT                   /db_xref="GOA:Q06952"
FT                   /db_xref="HSSP:1DB3"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q06952"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="AAF93419.1"
FT                   /translation="MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRV
FT                   DHLYKDPHEEDVNFKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTA
FT                   DVDAIGTLRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKM
FT                   YAYWITINYRESYGIYACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNL
FT                   DALRDWGHAKDYVKMQWMMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKG
FT                   VDEKAVVKSVIGTKAPAIKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITL
FT                   QQMVSEMVASDLEQAQSHALLKKHGYNVNVSVE"
XX
SQ   Sequence 1122 BP; 363 A; 184 C; 260 G; 315 T; 0 other; 1131776898 CRC32;
     atgaataaaa aagttgcgtt aatcacaggc attactggac aagatggttc ttatctagcg        60
     gagtttttgc tagaaaaagg gtatgaagta catggaatta aaagacgttc atctttattc       120
     aatacacaac gtgttgatca tctttacaaa gacccacatg aggaagatgt aaatttcaaa       180
     ctacattacg gagaccttac ggattcctct aacttgactc gtatattagc ggaagtacag       240
     ccagatgaag tctataactt gggcgcgcag tcccatgtgg cggttagttt ccagtcaccg       300
     gaatatacag cggacgtaga tgctattgga actttaaggc tactagaagc aatcagattt       360
     ttaggtttga cgaaaaaaac taagttttat caagcctcaa cttcagagct ttatggctta       420
     gtacaagaaa tacctcagaa agaaactacc cctttttatc ctagaagccc ttatgctgtg       480
     gcaaagatgt atgcgtattg gataacaatt aattatagag aatcgtacgg aatatacgcg       540
     tgtaatggca tactttttaa ccacgaatcc cctagacgag gagaaacttt tgtaactcgc       600
     aaaataactc gggggatggc aaacattgcg caagggttag aaaaatgcct ttttatggga       660
     aatttggacg ctcttcgaga ttgggggcat gctaaagatt acgttaagat gcaatggatg       720
     atgttacagc aagatgaacc tagagatttt gttattgcta caggtgtaca gtatagcgta       780
     agagagttta ttgatatgtc agcacgagaa ctaggcattg agttagaatt tgtcggtaag       840
     ggtgtagatg aaaaagctgt agtgaagtca gttattggaa cgaaagctcc tgcaatcaag       900
     gttggtgaca ttattgtagc tgtggatcct gcatatttta gacccgcaga ggtagaaacg       960
     ctgttaggtg atcctagcct agctaagaag gagcttggat gggtgccaga aattacttta      1020
     caacagatgg tttctgaaat ggtagcttct gatttagaac aagctcaaag tcatgcacta      1080
     ttgaaaaaac atggctataa cgtaaatgta tctgtagagt ga                         1122
//
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