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EBI Dbfetch

ID   AAF79729; SV 1; linear; genomic DNA; STD; PLN; 2706 BP.
XX
PA   AC005106.2
XX
DE   Arabidopsis thaliana (thale cress) T25N20.22
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2706
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="1"
FT                   /mol_type="genomic DNA"
FT                   /clone="T25N20"
FT   CDS             complement(join(AC005106.2:79953..80201,
FT                   AC005106.2:80300..80485,AC005106.2:80572..80622,
FT                   AC005106.2:80699..81499,AC005106.2:81604..81833,
FT                   AC005106.2:81974..82035,AC005106.2:82117..82200,
FT                   AC005106.2:82289..82407,AC005106.2:82530..82649,
FT                   AC005106.2:82801..82960,AC005106.2:83055..83244,
FT                   AC005106.2:83329..83397,AC005106.2:83510..83657,
FT                   AC005106.2:83704..83830,AC005106.2:83906..84015))
FT                   /codon_start=1
FT                   /product="T25N20.22"
FT                   /note="similar to beta-1,3-glucan synthase catalytic
FT                   subunit 1 dbj|BAA21535.1;  similar to ESTs gb|AW618017.1,
FT                   gb|AW96467.1, gb|AI166257.1, gb|AW934048.1, gb|AW755666.1,
FT                   gb|AI782319.1, gb|AW040575.1, gb|AI996136.1, gb|AW309809.1,
FT                   and emb|F15172.1"
FT                   /db_xref="GOA:Q9AUE0"
FT                   /db_xref="InterPro:IPR003440"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9AUE0"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAF79729.1"
FT                   /translation="MDVPSNLEARRRLTFFSNSLFMDMPPAPKIRNMLSFSVLTPYFSE
FT                   DVLFSIFGLEQQNEDGVSILFYLQKIFPGFTFPSLSPWLTSDEWTNFLERVKCGNEEEL
FT                   RAREDLEEELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDMAKDEELLKGYKALELT
FT                   SEEASKSGGSLWAQCQALADMKFTFVVSCQQYSIHKRSGDQRAKDILRLMTTYPSIRVA
FT                   YIDEVEQTHKESYKGTEEKIYYSALVKAAPQTKPMDSSESVQTLDQLIYRIKLPGPAIL
FT                   GEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAFKMRNLLQEFLEKHGGVRCPTILGL
FT                   REHIFTGSVSSLAWFMSNQENSFVTIGQRVLASPLKVRFHYGHPDIFDRLFHLTRGGFN
FT                   STLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDLYRLGHRFDFFRM
FT                   LSCYFTTIGFYFSTMLTVLTVYVFLYGRLYLVLSGLEEGLSSQRAFRNNKPLEAALASQ
FT                   SFVQIGFLMALPMMMEIGLERGFHNALIEFVLMQLQLASVFFTFQLGTKTHYYGRTLFH
FT                   GGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKGIELMILLLVYQIFGQSYRGVVTYIL
FT                   ITVSIWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIYNRGGIGVPPEKSWESWWE
FT                   KELEHLRHSGVRGITLEIFLALRFFIFQYGLVYHLSTFKGKNQSFWVYGASWFVILFIL
FT                   LIVKGLGVGRRRFSTNFQLLFRIIKGLVFLTFVAILITFLALPLITIKDLFICMLAFMP
FT                   TGWGMLLIAQACKPLIQQLGIWSSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTR
FT                   MLFNQAFSRGLQISRILGGQRKDRSSKNKE"
XX
SQ   Sequence 2706 BP; 725 A; 523 C; 635 G; 823 T; 0 other; 1828199830 CRC32;
     atggatgttc catccaactt ggaagctcga aggcgtctta ctttcttttc aaattcacta        60
     ttcatggaca tgcctcctgc acccaagatc cgcaacatgc tttccttctc ggtccttaca       120
     ccatactttt cagaggatgt tcttttctcc atatttggct tagaacagca aaatgaagat       180
     ggagtttcta tactctttta cttgcagaag atcttcccag gtttcacttt tccatctctg       240
     agtccatggc ttacatcaga tgaatggaca aactttctgg aacgagttaa atgtggcaac       300
     gaagaagaac taagagcaag agaggatttg gaagaggagc ttcgtctttg ggcatcttac       360
     agaggccaaa ctctgactaa aactgtgcga ggaatgatgt attaccgaaa ggctttggaa       420
     cttcaggcct tccttgatat ggcaaaggat gaagaattat taaaaggcta caaggctctc       480
     gagttaacca gtgaagaagc atcaaagagc ggagggtcac tttgggcgca gtgtcaagca       540
     cttgcagata tgaagttcac ctttgtggtt tcttgtcaac aatacagtat tcataagaga       600
     tctggcgacc aacgtgctaa agacatattg agacttatga cgacgtatcc gtctattcgt       660
     gtcgcctata tcgatgaggt agagcaaaca cataaagaaa gttataaggg gacagaggag       720
     aaaatttatt actcagcgct tgtaaaagct gctccacaga ccaaaccaat ggattcttct       780
     gaatctgttc aaacactaga tcagctcatt tatcggatta agcttccggg accagctata       840
     ctaggagagg gaaagccgga aaatcagaac catgctatca tatttacccg tggagaaggg       900
     ttgcagacga tagacatgaa tcaggacaac tacatggagg aagctttcaa aatgaggaac       960
     ttgctgcaag agtttcttga aaagcatgga ggcgtaagat gtcctacgat tcttggtctt      1020
     agagagcata ttttcactgg aagtgtgtct tctcttgcat ggtttatgtc aaatcaagag      1080
     aacagttttg taacgattgg gcaaagagtg ctagctagtc ccttgaaagt acgattccat      1140
     tacggacatc cagatatttt tgatcgtctg tttcacctta ccagaggtgg ttttaattct      1200
     actctgcgtg aaggaaatgt gactcatcat gaatatatac aagttggtaa agggagagat      1260
     gtgggcctca accagatctc aatgtttgag gcaaaaatcg ccaatggaaa tggcgagcaa      1320
     actttgagtc gcgaccttta taggctagga caccgatttg atttcttccg gatgctgtct      1380
     tgttatttca ccacaattgg gttctacttc agtaccatgt taaccgtgct tacggtgtat      1440
     gtgtttcttt atggacggtt atatctagta cttagtgggc ttgaagaagg attgagtagc      1500
     caacgagctt tccgtaacaa taagcctctt gaggcagctc ttgcttctca atcatttgtg      1560
     cagattggtt ttttaatggc tttgcctatg atgatggaga ttggacttga gagggggttc      1620
     cacaatgcat tgattgagtt tgtgctgatg cagttacaac ttgcttccgt ctttttcacg      1680
     tttcagctcg ggacaaaaac acattactac ggaaggacat tgtttcatgg aggcgcagag      1740
     tatagaggaa ctggtcgagg gtttgtggtc ttccacgcga aatttgctga gaactatagg      1800
     ttctattccc gtagtcactt tgtgaagggc attgaactta tgattcttct actggtatat      1860
     cagatctttg gtcaatcata taggggtgtg gttacttata ttctgatcac tgtttcgata      1920
     tggttcatgg tggtgacatg gctctttgct cctttccttt tcaatccgtc tggttttgag      1980
     tggcaaaaga ttgttgatga ctggacagac tggaacaaat ggatttataa ccgaggagga      2040
     attggtgtcc ctcctgagaa gagttgggaa tcttggtggg agaaagagtt agaacatctt      2100
     agacattcag gggttcgtgg tatcaccctt gagatctttt tggccttgcg cttcttcatc      2160
     tttcaatatg gacttgtgta tcatctcagt accttcaaag gaaaaaatca gagcttttgg      2220
     gtttatggag cgtcatggtt tgtgatctta ttcattctac tgattgtgaa gggtttgggc      2280
     gttggaaggc gaagattcag cacgaatttc cagcttctat tcagaatcat aaagggtctt      2340
     gtgttcctca catttgtggc aattctcata actttcctcg cacttcctct gataacaatc      2400
     aaagacttat tcatctgcat gcttgccttc atgccaactg gatggggaat gcttctcatt      2460
     gcacaagcgt gtaagcctct gatccaacag ctagggatat ggtcatcagt taggacgcta      2520
     gctcgaggct acgagatcgt gatgggcttg cttctgttca caccagttgc gtttttggcc      2580
     tggtttcctt ttgtgtctga gttccagaca agaatgctct ttaaccaagc ctttagtaga      2640
     ggtctacaaa tctctcgtat tcttggtggt caaagaaaag accggtcttc aaaaaacaag      2700
     gagtga                                                                 2706
//


  
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