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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF63815; SV 1; linear; genomic DNA; STD; PLN; 1689 BP.
XX
PA   AC023912.5
XX
DE   Arabidopsis thaliana (thale cress) pectin methylesterase, putative
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1689
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="III"
FT                   /map="mi403"
FT                   /cultivar="Columbia"
FT                   /mol_type="genomic DNA"
FT                   /clone="F3E22"
FT   CDS             complement(join(AC023912.5:10376..11064,
FT                   AC023912.5:11138..11500,AC023912.5:11609..12245))
FT                   /codon_start=1
FT                   /gene="F3E22.3"
FT                   /product="pectin methylesterase, putative"
FT                   /db_xref="GOA:Q8GXA1"
FT                   /db_xref="HSSP:1GQ8"
FT                   /db_xref="InterPro:IPR006501"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8GXA1"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAF63815.1"
FT                   /translation="MGSDGDKKKKFIVAGSVSGFLVIMVVSVAVVTSKHSPKDDENHIR
FT                   KTTKAVQAVCAPTDFKDTCVNSLMGASPDSDDPVDLIKLGFKVTIKSINESLEKASGDI
FT                   KAKADKNPEAKGAFELCEKLMIDAIDDLKKCMDHGFSVDQIEVFVEDLRVWLSGSIAFQ
FT                   QTCMDSFGEIKSNLMQDMLKIFKTSRELSSNSLAMVTRISTLIPNSNLTAKYARKLLST
FT                   EDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVPFI
FT                   IHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHF
FT                   TAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGT
FT                   VDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIP
FT                   MKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGS
FT                   NQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWIPQTQVPYTAKV"
XX
SQ   Sequence 1689 BP; 501 A; 401 C; 401 G; 386 T; 0 other; 2587631729 CRC32;
     atgggttctg atggtgacaa gaagaagaaa ttcatcgtcg ccggtagtgt ctccggtttt        60
     ctagtcatca tggttgtctc tgtagccgtt gtaacgtcta aacactctcc caaagacgat       120
     gaaaatcata tcagaaaaac caccaaagcg gttcaagcag tttgtgcacc cactgacttc       180
     aaagacactt gtgttaacag cttaatgggt gcttctcccg attccgatga ccctgtcgac       240
     ctcatcaaac tcggcttcaa ggtcactatc aaatccatca acgaaagcct ggaaaaggcc       300
     tctggagata tcaaagccaa ggctgacaag aacccagaag caaagggtgc tttcgagctg       360
     tgtgagaagc tgatgattga tgctatcgat gacttgaaga agtgtatgga tcatggattc       420
     tcggttgatc agatcgaggt ctttgttgag gatctacggg tttggctaag tggctccatc       480
     gcattccagc aaacatgtat ggattccttt ggggaaatta agtctaatct tatgcaagac       540
     atgctcaaga tcttcaaaac atcaagagag cttagtagca atagccttgc catggttact       600
     agaatctcca ctcttatccc aaactccaac cttacagcaa agtacgcgag aaagcttctg       660
     tctacagaag atagtatccc aacttgggtt ggaccagagg cacgacggct catggcagct       720
     caaggaggag gacctggacc tgtgaaggct aatgccgtgg tggctcaaga cggaactgga       780
     cagttcaaga ctatcaccga tgctctaaat gctgtgccta aaggcaacaa agtgccattc       840
     atcattcaca tcaaagaagg tatctacaag gagaaagtta cggtcaccaa gaaaatgcct       900
     cacgtaactt tcatcggcga tgggccaaac aagactctaa tcaccggtag tctcaatttc       960
     ggtatcggca aggtcaagac cttcctaaca gccacaatca caatcgaagg cgaccacttc      1020
     acagcgaaga acatcggaat cgagaacaca gctggaccag aaggaggaca agcggtggcg      1080
     ttaagagtct cggctgatta cgccgtattc cacagctgtc aaatcgacgg gcaccaagac      1140
     acgttatacg ttcactctca ccggcaattc taccgtgact gcacagtctc gggcaccgtc      1200
     gatttcatct tcggagacgc gaaatgcatc ctccagaact gtaaaatcgt cgtccgaaaa      1260
     cctaacaaag gtcaaacgtg tatggttaca gctcagggac gaagtaacgt ccgtgaatcg      1320
     acaggattgg tgctccatgg ctgccatata acgggagatc cagcgtatat tccgatgaaa      1380
     tctgtgaata aagcttactt aggaagaccg tggaaggagt tctcgaggac aatcattatg      1440
     aaaacgacga tcgatgacgt catcgatccg gcgggatggc ttccctggag tggagatttt      1500
     gcgctcaaga cgctatacta cgccgagcat atgaatactg ggcctggatc gaatcaggcc      1560
     caaagagtta aatggcccgg aattaagaaa ctaacgcccc aagatgctct tttatacact      1620
     ggcgacagat tcttacgtgg cgatacgtgg atcccacaaa cacaagttcc gtatacagct      1680
     aaagtgtag                                                              1689
//
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