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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AAF63491; SV 1; linear; mRNA; STD; HUM; 2568 BP.
XX
PA   AF239243.1
XX
DE   Homo sapiens (human) histone deacetylase 7
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2568
FT                   /organism="Homo sapiens"
FT                   /chromosome="12"
FT                   /map="12q13.1"
FT                   /mol_type="mRNA"
FT                   /cell_line="HeLa S3"
FT                   /tissue_type="cervical carcinoma"
FT   CDS             AF239243.1:216..2783
FT                   /codon_start=1
FT                   /gene="HDAC7"
FT                   /product="histone deacetylase 7"
FT                   /note="HDA1 class II; associated with rhabdomyosarcoma"
FT                   /db_xref="GOA:Q8WUI4"
FT                   /db_xref="HGNC:14067"
FT                   /db_xref="InterPro:IPR017320"
FT                   /db_xref="PDB:3C0Y"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8WUI4"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="AAF63491.1"
FT                   /translation="MDLRVGQRPPVEPPPEPTLLALQRPQRLHHHLFLAGLQQQRSVEP
FT                   MRLSMDTPMPELQVGPQEQELRQLLHKDKSKRSAVASSVVKQKLAEVILKKQQAALERT
FT                   VHPNSPGIPYRTLEPLETEGATRSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRY
FT                   KPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPI
FT                   LGDSDRRTHPTLGPRGPILGSPHTPLFLPHGLEPEAGGTLPSRLQPILLLDPSGSHAPL
FT                   LTVPGLGPLPFHFAQSLMTTERLSGSGLHWPLSRTRSEPLPPSATAPPPPGPMQPRLEQ
FT                   LKTHVQVIKRSAKPSEKPRLRQIPSAEDLETDGGGPGQVVDDGLEHRELGHGQPEARGP
FT                   APLQQHPQVLLWEQQRLAGRLPRGSTGDTVLLPLAQGGHRPLSRAQSSPAAPASLSAPE
FT                   PASQARVLSSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQE
FT                   RGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFEML
FT                   PCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHST
FT                   AMGFCFFNSVAIACRQLQQQSKASKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHR
FT                   HDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFS
FT                   PDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAIC
FT                   DASEACVAALLGNRVDPLSEEGWKQKPQPQCHPLSGGRDPGAQ"
XX
SQ   Sequence 2568 BP; 486 A; 883 C; 758 G; 441 T; 0 other; 1603907053 CRC32;
     atggacctgc gggtgggcca gcggccccca gtggagcccc caccagagcc cacattgctg        60
     gccctgcagc gtccccagcg cctgcaccac cacctcttcc tagcaggcct gcagcagcag       120
     cgctcggtgg agcccatgag gctctccatg gacacgccga tgcccgagtt gcaggtggga       180
     ccccaggaac aagagctgcg gcagcttctc cacaaggaca agagcaagcg aagtgctgta       240
     gccagcagcg tggtcaagca gaagctagcg gaggtgattc tgaaaaaaca gcaggcggcc       300
     ctagaaagaa cagtccatcc caacagcccc ggcattccct acagaaccct ggagcccctg       360
     gagacggaag gagccacccg ctccatgctc agcagctttt tgcctcctgt tcccagcctg       420
     cccagtgacc ccccagagca cttccctctg cgcaagacag tctctgagcc caacctgaag       480
     ctgcgctata agcccaagaa gtccctggag cggaggaaga atccactgct ccgaaaggag       540
     agtgcgcccc ccagcctccg gcggcggccc gcagagaccc tcggagactc ctccccaagt       600
     agtagcagca cgcccgcatc agggtgcagc tcccccaatg acagcgagca cggccccaat       660
     cccatcctgg gcgacagtga ccgcaggacc catccgactc tgggccctcg ggggccaatc       720
     ctggggagcc cccacactcc cctcttcctg ccccatggct tggagcccga ggctgggggc       780
     accttgccct ctcgcctgca gcccattctc ctcctggacc cctcaggctc tcatgccccg       840
     ctgctgactg tgcccgggct tgggcccttg cccttccact ttgcccagtc cttaatgacc       900
     accgagcggc tctctgggtc aggcctccac tggccactga gccggactcg ctcagagccc       960
     ctgcccccca gtgccaccgc tcccccaccg ccgggcccca tgcagccccg cctggagcag      1020
     ctcaaaactc acgtccaggt gatcaagagg tcagccaagc cgagtgagaa gccccggctg      1080
     cggcagatac cctcggctga agacctggag acagatggcg ggggaccggg ccaggtggtg      1140
     gacgatggcc tggagcacag ggagctgggc catgggcagc ctgaggccag aggccccgct      1200
     cctctccagc agcaccctca ggtgttgctc tgggaacagc agcgactggc tgggcggctc      1260
     ccccggggca gcaccgggga cactgtgctg cttcctctgg cccagggtgg gcaccggcct      1320
     ctgtcccggg ctcagtcttc cccagccgca cctgcctcac tgtcagcccc agagcctgcc      1380
     agccaggccc gagtcctctc cagctcagag acccctgcca ggaccctgcc cttcaccaca      1440
     gggctgatct atgactcggt catgctgaag caccagtgct cctgcggtga caacagcagg      1500
     cacccggagc acgccggccg catccagagc atctggtccc ggctgcagga gcgggggctc      1560
     cggagccagt gtgagtgtct ccgaggccgg aaggcctccc tggaagagct gcagtcggtc      1620
     cactctgagc ggcacgtgct cctctacggc accaacccgc tcagccgcct caaactggac      1680
     aacgggaagc tggcagggct cctggcacag cggatgtttg agatgctgcc ctgtggtggg      1740
     gttggggtgg acactgacac catctggaat gagcttcatt cctccaatgc agcccgctgg      1800
     gccgctggca gtgtcactga cctcgccttc aaagtggctt ctcgtgagct aaagaatggt      1860
     ttcgctgtgg tgcggccccc aggacaccat gcagatcatt caacagccat gggcttctgc      1920
     ttcttcaact cagtggccat cgcctgccgg cagctgcaac agcagagcaa ggccagcaag      1980
     gccagcaaga tcctcattgt agactgggac gtgcaccatg gcaacggcac ccagcaaacc      2040
     ttctaccaag accccagtgt gctctacatc tccctgcatc gccatgacga cggcaacttc      2100
     ttcccgggga gtggggctgt ggatgaggta ggggctggca gcggtgaggg cttcaatgtc      2160
     aatgtggcct gggctggagg tctggacccc cccatggggg atcctgagta cctggctgct      2220
     ttcaggatag tcgtgatgcc catcgcccga gagttctctc cagacctagt cctggtgtct      2280
     gctggatttg atgctgctga gggtcacccg gccccactgg gtggctacca tgtttctgcc      2340
     aaatgttttg gatacatgac gcagcaactg atgaacctgg caggaggcgc agtggtgctg      2400
     gccttggagg gtggccatga cctcacagcc atctgtgacg cctctgaggc ctgtgtggct      2460
     gctcttctgg gtaacagggt ggatcccctt tcagaagaag gctggaaaca gaaaccccaa      2520
     cctcaatgcc atccgctctc tggaggccgt gatccgggtg cacagtaa                   2568
//
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